Jatropha Genome Database

JcCA0154801.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154801.30 + phase: 0 
         (68 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g01410.1                                                        59   9e-10
Glyma20g01400.1                                                        57   4e-09
Glyma10g15190.1                                                        56   9e-09
Glyma07g28880.1                                                        53   7e-08
Glyma20g23540.1                                                        49   2e-06
Glyma20g23510.1                                                        48   2e-06
Glyma10g43290.1                                                        48   2e-06
Glyma10g43300.2                                                        48   2e-06
Glyma10g43300.1                                                        48   2e-06
Glyma10g43330.1                                                        48   3e-06

>Glyma20g01410.1 
          Length = 215

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 6/62 (9%)

Query: 1   MNKFGKKAENFAQVVREHV------GATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEK 54
           +NK G+KA+NF+Q VREHV        T   K+ LG +ILQVG V+++F Q F V++ EK
Sbjct: 49  INKLGRKADNFSQEVREHVRLGPTITETVMGKLRLGARILQVGGVKRVFNQFFTVRQGEK 108

Query: 55  LL 56
           LL
Sbjct: 109 LL 110


>Glyma20g01400.1 
          Length = 222

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 6/62 (9%)

Query: 1   MNKFGKKAENFAQVVREHVGA------TCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEK 54
           MNK G+K   FA  ++EHV        T K K++LG +ILQVG V+K+F QLF VK+ EK
Sbjct: 56  MNKLGRKTNIFATGLKEHVKLGQKITDTVKGKLSLGARILQVGGVKKVFMQLFSVKDGEK 115

Query: 55  LL 56
           LL
Sbjct: 116 LL 117


>Glyma10g15190.1 
          Length = 146

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 6/64 (9%)

Query: 1   MNKFGKKAENFAQVVREHV------GATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEK 54
           MNK G+K   FA  + EHV        T K K++LG +IL VG V+K+F QLFRVK+ EK
Sbjct: 81  MNKLGRKTNIFATGLNEHVKLGQKITDTMKGKLSLGARILHVGGVKKVFMQLFRVKDGEK 140

Query: 55  LLNP 58
           LL  
Sbjct: 141 LLKA 144


>Glyma07g28880.1 
          Length = 223

 Score = 52.8 bits (125), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/63 (49%), Positives = 41/63 (65%), Gaps = 7/63 (11%)

Query: 1   MNKFGKKAENFAQVVREHVGA------TCKRKVNLGDKILQVGAVQKIFRQLFRVKE-EE 53
           MN+ G+K  N A  ++EHV        T K K++LG +ILQVG V+K+F QLF VK+  E
Sbjct: 54  MNRLGRKTNNLATGLKEHVKLGPKITDTVKGKLSLGARILQVGGVEKVFMQLFSVKDGGE 113

Query: 54  KLL 56
           KLL
Sbjct: 114 KLL 116


>Glyma20g23540.1 
          Length = 213

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 6/52 (11%)

Query: 11  FAQVVREHV------GATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEKLL 56
           F Q  REHV        T K K+++G +ILQVG V+K+F QLF V+E EKLL
Sbjct: 57  FLQRFREHVRLGPKITDTVKGKLSMGARILQVGGVEKVFMQLFSVREGEKLL 108


>Glyma20g23510.1 
          Length = 196

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/42 (50%), Positives = 33/42 (78%)

Query: 15 VREHVGATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEKLL 56
          +R ++  T KRK++LG +IL+VG V+K+F+Q F V+E E+LL
Sbjct: 50 LRTNISETVKRKLSLGARILRVGGVEKVFKQFFNVEEGERLL 91


>Glyma10g43290.1 
          Length = 213

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/52 (51%), Positives = 34/52 (65%), Gaps = 6/52 (11%)

Query: 11  FAQVVREHV------GATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEKLL 56
           F Q  REHV        T K K+++G +ILQVG V+K+F QLF V+E EKLL
Sbjct: 57  FLQRFREHVRLGPKITDTVKGKLSMGARILQVGGVEKVFMQLFSVREGEKLL 108


>Glyma10g43300.2 
          Length = 150

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 33/42 (78%)

Query: 15 VREHVGATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEKLL 56
          +R ++  T KRK++LG +IL+VG V+K+F+Q F ++E E+LL
Sbjct: 48 LRTNISETVKRKISLGARILRVGGVEKVFKQFFSMEEGERLL 89


>Glyma10g43300.1 
          Length = 194

 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 33/42 (78%)

Query: 15 VREHVGATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEKLL 56
          +R ++  T KRK++LG +IL+VG V+K+F+Q F ++E E+LL
Sbjct: 48 LRTNISETVKRKISLGARILRVGGVEKVFKQFFSMEEGERLL 89


>Glyma10g43330.1 
          Length = 135

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 21/38 (55%), Positives = 30/38 (78%)

Query: 19 VGATCKRKVNLGDKILQVGAVQKIFRQLFRVKEEEKLL 56
          +  T KRK++LG +ILQVG V+K+F+Q F V+E E+LL
Sbjct: 1  ISETVKRKLSLGARILQVGGVEKVFKQFFSVREGERLL 38