Jatropha Genome Database

JcCA0154771.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154771.10 - phase: 0 /pseudo
         (340 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g11690.1                                                        54   4e-07
Glyma05g21790.1                                                        51   2e-06
Glyma03g23760.1                                                        50   3e-06
Glyma16g08590.1                                                        49   6e-06

>Glyma11g11690.1 
          Length = 369

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%)

Query: 241 FIQKLISKKQHIEAIGIIHAFKLANKFPPVLLLKDYLDNSXXXXXXXXXXXXSLEGQIEA 300
           F++ LI K+QHIEA+  I A+KLA+K  PV LL+ ++               S+E +I+ 
Sbjct: 193 FVRNLIMKQQHIEAVRFICAYKLADKIQPVDLLRQHVAKVKSVTNRFACMKESVEQKIKV 252

Query: 301 REKRIADVKCALRCIGNYNIE 321
           R++ I  ++  L CI   N+E
Sbjct: 253 RDEEIVGLRTVLECISENNLE 273


>Glyma05g21790.1 
          Length = 543

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 240 CFIQKLISKKQHIEAIGIIHAFKLANKFPPVLLLKDYLDNSXXXXXXXXXXXXSL-EGQI 298
             ++ LI+  + I A+  IHAF+L   FPPV LLK YL N              +   + 
Sbjct: 337 AVVESLINTGKQIAAVHFIHAFQLQESFPPVPLLKAYLKNRRRNSQVKTGNVRDITSAKN 396

Query: 299 EAREKRIADVKCALRCIGNYNIEYGPSLGSLHQMVVSLE 337
           +A  + +A ++  ++CI  Y +E      +L + V+ LE
Sbjct: 397 DANAQELAALRAVIKCIEEYKLESDYPPDTLRKRVLQLE 435


>Glyma03g23760.1 
          Length = 546

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%)

Query: 242 IQKLISKKQHIEAIGIIHAFKLANKFPPVLLLKDYLDNSXXXXXXXXXXXXSLEGQIEAR 301
           I+ L++  + I+A+ +  AF L  +F PV LLK YL ++            S   QIE  
Sbjct: 352 IEVLVNSGRQIDAVNLAFAFDLTEQFCPVSLLKSYLKDARKASSPVRSAHSSPTAQIEVN 411

Query: 302 EKRIADVKCALRCIGNYNIEYGPSLGSLHQMVVSLEEG 339
           E+ +  +K  ++CI  + ++    L  L + +V LE+ 
Sbjct: 412 ERELVALKAVIKCIEEHKLDEQYPLDPLQKRLVQLEKA 449


>Glyma16g08590.1 
          Length = 546

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%)

Query: 242 IQKLISKKQHIEAIGIIHAFKLANKFPPVLLLKDYLDNSXXXXXXXXXXXXSLEGQIEAR 301
           I  L++  + I+A+ +  AF L  +F PV LLK YL ++            S   QIE  
Sbjct: 352 IGVLVNSGRQIDAVNLAFAFDLTEQFCPVSLLKSYLKDARKASSPVRSVNSSPTAQIEVN 411

Query: 302 EKRIADVKCALRCIGNYNIEYGPSLGSLHQMVVSLEEG 339
           E+ +  +K  ++CI  + ++    L  L + +V LE+ 
Sbjct: 412 ERELVALKAVIKCIEEHKLDEQYPLDPLQKRLVQLEKA 449