Jatropha Genome Database

JcCA0154641.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154641.10 - phase: 0 
         (129 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g11290.1                                                       114   3e-26
Glyma13g25580.1                                                        87   3e-18
Glyma15g35430.1                                                        59   1e-09

>Glyma13g11290.1 
          Length = 220

 Score =  114 bits (284), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 51/85 (60%), Positives = 61/85 (71%)

Query: 17  YDVEYRAIADDAWYSVRTVLNGEKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRFRP 76
           Y  E+RA  DDAWY+VR +L GE+L VKY NFSDEND  FEP  F    ++EDF++RFRP
Sbjct: 20  YTTEFRAYNDDAWYTVRVLLEGERLIVKYQNFSDENDEAFEPSRFGDCEDLEDFKERFRP 79

Query: 77  ISIQLQDRECKNVPNGAVVCASHSF 101
           +S QLQD EC+    GA VCA HSF
Sbjct: 80  LSRQLQDAECRRFGPGARVCACHSF 104


>Glyma13g25580.1 
          Length = 373

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 53/85 (62%)

Query: 17  YDVEYRAIADDAWYSVRTVLNGEKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRFRP 76
           Y VE+RA  DDAWY+ R  L GE L VKY NF DE D+ F    F  + ++++F +RFR 
Sbjct: 14  YRVEFRACKDDAWYATRVSLEGETLKVKYFNFPDEYDNAFRASEFGDLEKLQEFGERFRT 73

Query: 77  ISIQLQDRECKNVPNGAVVCASHSF 101
           +S Q QD +C+++  G  VCA   F
Sbjct: 74  LSKQAQDSDCRSLAEGVWVCACQCF 98


>Glyma15g35430.1 
          Length = 84

 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 37/64 (57%), Gaps = 9/64 (14%)

Query: 17 YDVEYRAIADDAWYSVRTVLNGEKLTVKYDNFSDENDSIFEPQNFKSVAEIEDFEKRFRP 76
          Y VE+RA  DDAWY+ R  L GE LTVKY N  DE D+ F            +F +RFRP
Sbjct: 8  YRVEFRACKDDAWYTARVSLEGETLTVKYLNLPDEYDNAFRAS---------EFGERFRP 58

Query: 77 ISIQ 80
          +S Q
Sbjct: 59 LSKQ 62