Jatropha Genome Database

JcCA0154561.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154561.20 - phase: 0 /partial
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g47380.1                                                       296   6e-81
Glyma04g16180.1                                                       296   6e-81
Glyma13g09100.1                                                       104   4e-23
Glyma18g41550.1                                                        94   4e-20
Glyma12g32570.1                                                        86   2e-17

>Glyma06g47380.1 
          Length = 434

 Score =  296 bits (757), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 145/146 (99%), Positives = 145/146 (99%)

Query: 1   EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGY 60
           EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGY
Sbjct: 289 EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGY 348

Query: 61  WTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDR 120
           WTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDR
Sbjct: 349 WTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDR 408

Query: 121 HLKAAGRGGLEVDVSKLIWTPYKEQG 146
           HLKAAGRGGLEVDVSKLIWTPYKEQ 
Sbjct: 409 HLKAAGRGGLEVDVSKLIWTPYKEQS 434


>Glyma04g16180.1 
          Length = 434

 Score =  296 bits (757), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 145/146 (99%), Positives = 145/146 (99%)

Query: 1   EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGY 60
           EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGY
Sbjct: 289 EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGLLSYRGY 348

Query: 61  WTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDR 120
           WTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDR
Sbjct: 349 WTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQSLELIQYRKGQHVICADPKVLDR 408

Query: 121 HLKAAGRGGLEVDVSKLIWTPYKEQG 146
           HLKAAGRGGLEVDVSKLIWTPYKEQ 
Sbjct: 409 HLKAAGRGGLEVDVSKLIWTPYKEQS 434


>Glyma13g09100.1 
          Length = 125

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 55/73 (75%), Positives = 58/73 (79%), Gaps = 4/73 (5%)

Query: 31  FSYELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAE 90
           FSYEL KKEGKVGTPERPLSDLGLLSYRGYWTRVLLDIL KHKGNISIKEL     ++ E
Sbjct: 41  FSYELEKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILNKHKGNISIKEL----LVQRE 96

Query: 91  DILTTLQSLELIQ 103
            IL  LQ   L +
Sbjct: 97  RILLVLQPPTLFE 109


>Glyma18g41550.1 
          Length = 101

 Score = 94.4 bits (233), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 5/91 (5%)

Query: 33  YELSKKEGKVGTPERPLSDLGLLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDI 92
           YEL KKEGK+GTPERPLSDLGLLSYRGYWTRVLLDIL KHKGNISIK+          ++
Sbjct: 1   YELEKKEGKLGTPERPLSDLGLLSYRGYWTRVLLDILNKHKGNISIKKFLTTQVYLRNEV 60

Query: 93  LTTLQSLELIQYRKGQHVICADPKVLDRHLK 123
           L      EL+  R+   ++   P + +  +K
Sbjct: 61  LQ-----ELLVQRERILLVLQPPTLFETEVK 86


>Glyma12g32570.1 
          Length = 155

 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/43 (93%), Positives = 41/43 (95%)

Query: 1   EKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVG 43
           EKHS+ESYNLACILTLPPYQRKGYGKFL AFSYELSKKEGKV 
Sbjct: 81  EKHSKESYNLACILTLPPYQRKGYGKFLFAFSYELSKKEGKVA 123