Jatropha Genome Database

JcCA0154561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154561.10 + phase: 0 
         (200 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g02430.1                                                       145   4e-35
Glyma14g33680.1                                                       142   2e-34
Glyma04g43320.1                                                       134   6e-32
Glyma06g11360.1                                                       122   2e-28

>Glyma13g02430.1 
          Length = 193

 Score =  145 bits (365), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 85/179 (47%), Positives = 107/179 (59%), Gaps = 18/179 (10%)

Query: 10  NFQLYHKSTFLPMLCSRPSIKDVCVPNKLEDRSMSFSSEPLSPKIGCMGQVKKHNKIIGF 69
           N  ++H+STFLPMLCSRPSIKDV +P +  D   SFS++PLSP+IGCMGQVK+HNKI+G 
Sbjct: 1   NLHIHHRSTFLPMLCSRPSIKDVSLP-QWRDPPGSFSNDPLSPRIGCMGQVKRHNKIVGL 59

Query: 70  PTXXXXXXXXNKITFTTRNDIPSVKYFKLKRIFSGKN---NFXXXXXXXXXXXXGLTLDG 126
            T        N I+ +     PSVKY KLK++FSGKN   N             G    G
Sbjct: 60  LTTKSNTA--NNISIS-----PSVKYSKLKKLFSGKNLGTNTINAATAPTASSCGSRPRG 112

Query: 127 ---AKGMPKIEDSK----ENSVSINIAEMDPPLPVIKKVHKPNGAGEEETLWKRRSGGV 178
              +  +P+    +    EN V I+I  MDPPLPVIK+V KP    + + LWKRRSGG 
Sbjct: 113 TVNSTNVPRNHKHRSSRNENVVPISIENMDPPLPVIKRVQKPEEERQVDNLWKRRSGGA 171


>Glyma14g33680.1 
          Length = 191

 Score =  142 bits (359), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/180 (46%), Positives = 109/180 (60%), Gaps = 20/180 (11%)

Query: 9   QNFQLYHKSTFLPMLCSRPSIKDVCVPNKLEDRSMSFSSEPLSPKIGCMGQVKKHNKIIG 68
           QN  ++H+STFLPMLCSRPSIKDV +P +  ++  SFS++PLSP+IGCMGQVK+HNKI+G
Sbjct: 1   QNLHIHHRSTFLPMLCSRPSIKDVSLP-QWREQLGSFSNDPLSPRIGCMGQVKRHNKIVG 59

Query: 69  FPTXXXXXXXXNKITFTTRNDIPSVKYFKLKRIFSGKN------NFXXXXXXXXXXXXGL 122
             T         K   T+ +  PSVKY KLK++FSGKN      N               
Sbjct: 60  LLT--------TKSNTTSISISPSVKYSKLKKLFSGKNLGTSIINATAPTATSCGSRPRG 111

Query: 123 TLDGAKGMPKIEDSK----ENSVSINIAEMDPPLPVIKKVHKPNGAGEEETLWKRRSGGV 178
           T++    +P+    +    EN V I++  MDPPLPVIK+V KP    + + LWKRRSGG 
Sbjct: 112 TVNSV-NVPRNHRHRSSKNENVVPISVENMDPPLPVIKRVQKPEEDRQLDNLWKRRSGGA 170


>Glyma04g43320.1 
          Length = 207

 Score =  134 bits (337), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/190 (44%), Positives = 108/190 (56%), Gaps = 23/190 (12%)

Query: 1   MGNGYNHHQNFQLYHKSTFLPMLCSRPSIKDVCVPNKLEDRSMSFSSEPLSPKIGCMGQV 60
           MGN  ++H  F  Y KSTFLPMLCSRPSIK+V +P +  D S S  ++PLSP+I CMGQV
Sbjct: 1   MGNENHYHHQF-YYQKSTFLPMLCSRPSIKEVTLP-RFRDPSASSGNDPLSPRISCMGQV 58

Query: 61  KKHNKIIGFPTXXXXXXXXNKITFTTRND--------IPSVKYFKLKRIFSGKNNFXXXX 112
           K++NKI G P         +++TFTT+ D         P VKY KLK++FSGKN      
Sbjct: 59  KRNNKISGIP-------PSHRLTFTTKTDNTNRNTTSSPIVKYSKLKKLFSGKNFIISTP 111

Query: 113 XXXXXXXXGLTLDG----AKGMPKIEDSKENSVSIN--IAEMDPPLPVIKKVHKPNGAGE 166
                     +          MPK +    N+V  N  I EMDPPLPV+K+V K     E
Sbjct: 112 KTTTATTTFSSCRSRHQEVSDMPKNQKCLSNNVVFNKSIEEMDPPLPVVKRVCKLEEPKE 171

Query: 167 EETLWKRRSG 176
            ++LWKRRSG
Sbjct: 172 LDSLWKRRSG 181


>Glyma06g11360.1 
          Length = 168

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 96/163 (58%), Gaps = 5/163 (3%)

Query: 14  YHKSTFLPMLCSRPSIKDVCVPNKLEDRSMSFSSEPLSPKIGCMGQVKKHNKIIGFPTXX 73
           Y KSTFLPMLCSRPSIK+V +P +  D S S  ++PLSP+I CMGQVK++NKI G P   
Sbjct: 3   YQKSTFLPMLCSRPSIKEVTLP-RFRDPSASSGNDPLSPRISCMGQVKRNNKIAGIPPSH 61

Query: 74  XXXXXXNKITFTTRNDIPSVKYFKLKRIFSGKNNFXXXXXXXXXXXXGLTLDGAKGMPKI 133
                    T T     P VKY+KLK++FSGK NF             ++   ++   +I
Sbjct: 62  RLTFTTKTNTNTNTTSSPIVKYYKLKKLFSGK-NFIISTPKPTTATSTISSCRSRQQ-QI 119

Query: 134 EDSKENSVSINIAEMDPPLPVIKKVHKPNGAGEEETLWKRRSG 176
            D  +N   I   EMDPPLPV+K+V     + E ++LWKRRSG
Sbjct: 120 SDVPKNQKVIE--EMDPPLPVVKRVSPLEESKELDSLWKRRSG 160