Jatropha Genome Database

JcCA0154411.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154411.20 + phase: 0 
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g16360.1                                                       168   2e-42
Glyma18g05170.2                                                       104   5e-23
Glyma18g05170.1                                                       104   5e-23
Glyma11g33030.1                                                       102   1e-22
Glyma14g38970.1                                                       102   2e-22
Glyma15g12370.1                                                        59   3e-09
Glyma09g01470.1                                                        58   6e-09
Glyma13g01100.1                                                        55   4e-08
Glyma07g39680.1                                                        52   3e-07
Glyma17g01130.1                                                        51   6e-07
Glyma17g07210.1                                                        48   5e-06
Glyma07g38090.1                                                        48   5e-06
Glyma13g01100.2                                                        48   5e-06

>Glyma01g16360.1 
          Length = 185

 Score =  168 bits (426), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/169 (55%), Positives = 123/169 (72%), Gaps = 1/169 (0%)

Query: 3   PLLKLLDSSLRFSVIPLSVASICLIVTNQQENSSYGDLKYSNLMGLKYMVCISAIGACYA 62
           P+L   DSSLR   IPLSVA++ + VTN+++NSSYG LKY+NL  LKYMV +SA+ ACYA
Sbjct: 17  PMLWFFDSSLRLCAIPLSVATMWITVTNKEDNSSYGMLKYNNLSALKYMVLVSALCACYA 76

Query: 63  FSAVACTWIRSLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACNSF 122
             A AC+ +R  V+K W+FFVSDQI+AYL +TS AA+ME+ YLAYNG +E +WSEAC+S+
Sbjct: 77  LLAAACSLVRCFVSKAWIFFVSDQIVAYLAITSVAAVMEMYYLAYNGAKEDSWSEACSSY 136

Query: 123 GKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPP-VSSKQVEGN 170
           G FC K+K                  ISA+RAFSVF+PP V+S++V+G+
Sbjct: 137 GSFCSKVKLALILHTITFCCFFVIAVISAFRAFSVFDPPFVNSQEVQGD 185


>Glyma18g05170.2 
          Length = 203

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%)

Query: 5   LKLLDSSLRFSVIPLSVASICLIVTNQQENSSYGDLKYSNLMGLKYMVCISAIGACYA-F 63
           L+  ++ LR   + L V+++ L++ N Q+N  YG + YS+L   +Y+V  + I A Y+ F
Sbjct: 31  LRTAETFLRLVPVGLCVSALVLMLKNSQQNE-YGSVDYSDLGAFRYLVHANGICAGYSLF 89

Query: 64  SAVACTWIR-SLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACNSF 122
           SAV     R S + + W FF+ DQ++ Y+ + + A   E++YLA  GD   TWS AC SF
Sbjct: 90  SAVIAAMPRPSTMPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAEKGDAATTWSSACGSF 149

Query: 123 GKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPPVS 163
           G+FCHK+                   IS+Y+ F+ ++ P S
Sbjct: 150 GRFCHKVTASVAITFVAVFCYVLLSLISSYKLFTNYDAPAS 190


>Glyma18g05170.1 
          Length = 203

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 89/161 (55%), Gaps = 3/161 (1%)

Query: 5   LKLLDSSLRFSVIPLSVASICLIVTNQQENSSYGDLKYSNLMGLKYMVCISAIGACYA-F 63
           L+  ++ LR   + L V+++ L++ N Q+N  YG + YS+L   +Y+V  + I A Y+ F
Sbjct: 31  LRTAETFLRLVPVGLCVSALVLMLKNSQQNE-YGSVDYSDLGAFRYLVHANGICAGYSLF 89

Query: 64  SAVACTWIR-SLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACNSF 122
           SAV     R S + + W FF+ DQ++ Y+ + + A   E++YLA  GD   TWS AC SF
Sbjct: 90  SAVIAAMPRPSTMPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAEKGDAATTWSSACGSF 149

Query: 123 GKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPPVS 163
           G+FCHK+                   IS+Y+ F+ ++ P S
Sbjct: 150 GRFCHKVTASVAITFVAVFCYVLLSLISSYKLFTNYDAPAS 190


>Glyma11g33030.1 
          Length = 206

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 90/161 (55%), Gaps = 3/161 (1%)

Query: 5   LKLLDSSLRFSVIPLSVASICLIVTNQQENSSYGDLKYSNLMGLKYMVCISAIGACYA-F 63
           L+  ++ LR   + L V+++ L++ + Q+N  YG + YS+L   +Y+V  + I A Y+ F
Sbjct: 34  LRTAETFLRLFPVGLCVSALVLMLKSSQQNE-YGSVDYSDLGAFRYLVHANGICAGYSLF 92

Query: 64  SAV-ACTWIRSLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACNSF 122
           SAV A     S + + W FF+ DQ++ Y+ + + A   E++YLA NGD   TWS AC SF
Sbjct: 93  SAVIAAMPCPSTIPRAWTFFLLDQVLTYIILAAGAVSTEVLYLAENGDAATTWSSACGSF 152

Query: 123 GKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPPVS 163
           G+FCHK+                   +S+Y+ F+ ++ P S
Sbjct: 153 GRFCHKVTASVAITFVAVFCYVLLSLVSSYKLFTKYDAPAS 193


>Glyma14g38970.1 
          Length = 208

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 91/167 (54%), Gaps = 3/167 (1%)

Query: 5   LKLLDSSLRFSVIPLSVASICLIVTNQQENSSYGDLKYSNLMGLKYMVCISAIGACYA-F 63
           L+++++ LR   I L V ++ +++ N QEN  YG + Y++L   +Y+V  + I A Y+ F
Sbjct: 35  LRVVETFLRLFPIGLCVTALVIMLKNSQENK-YGSVSYTDLGAFRYLVHANGICAGYSLF 93

Query: 64  SAVACTWIR-SLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACNSF 122
           SA+     R S ++  W FFV DQ++ Y+ +++ AA  E++YLA  G+    WS AC SF
Sbjct: 94  SAIFVALPRLSSMHIAWTFFVLDQVLTYIILSAGAASAEVLYLAEKGNMATAWSSACRSF 153

Query: 123 GKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPPVSSKQVEG 169
           G FCHK+                   IS+Y+ FS ++ P  S    G
Sbjct: 154 GPFCHKVTASTTITFVVVVFYVLLSLISSYKLFSKYDAPTVSNPSMG 200


>Glyma15g12370.1 
          Length = 202

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 10/164 (6%)

Query: 5   LKLLDSSLRFSVIPLSVASICLIVTNQQENSSYG---DLKYSNLMGLKYMVCISAIGACY 61
           +K+ +  LR  ++ L V +  L+ T+ +    +    + K++++  L ++V  + + A Y
Sbjct: 29  IKITELVLRCVILGLGVLAAVLVGTDSEVKEFFSFQKEAKFTDMKSLVFLVVANGLAAGY 88

Query: 62  AF-SAVAC--TWIRSLV----NKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVT 114
           +    + C  + IR  V       W  F  DQ+MAY+TV + AA  +   +A  G  E+ 
Sbjct: 89  SLIQGLRCILSMIRGRVLFSKPLAWAIFSGDQVMAYVTVVALAAAGQSGMIARVGQPELQ 148

Query: 115 WSEACNSFGKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVF 158
           W + CN +GKFC+++                   ISA+  F ++
Sbjct: 149 WMKICNMYGKFCNQVGEGIASAFVASLSMVVMSCISAFSLFRLY 192


>Glyma09g01470.1 
          Length = 203

 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 10/164 (6%)

Query: 5   LKLLDSSLRFSVIPLSVASICLIVTNQQENSSYG---DLKYSNLMGLKYMVCISAIGACY 61
           +K+ +  LR  ++ L V +  L+ T+ Q    +    + K++++  L ++V  + + + Y
Sbjct: 29  IKITELVLRCVILGLGVLAAVLVGTDSQVKEFFSFQKEAKFTDMKSLVFLVVANGLASGY 88

Query: 62  AF-SAVAC--TWIRSLV----NKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVT 114
           +    + C  + IR  V       W  F  DQ+MAY+TV +  A  +   +A  G  E+ 
Sbjct: 89  SLIQGLRCIISMIRGRVLFSKPLAWAIFSGDQVMAYVTVATVVAAGQSGVIARVGQPELQ 148

Query: 115 WSEACNSFGKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVF 158
           W + CN +GKFC+++                   ISA+  F ++
Sbjct: 149 WMKICNMYGKFCNQVGEGIASAFVASLSMVVLSCISAFSLFRLY 192


>Glyma13g01100.1 
          Length = 180

 Score = 54.7 bits (130), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 11/161 (6%)

Query: 12  LRFSVIPLSVASICLIVTNQQENSSYGDLK----YSNLMGLKYMVCISAIGACYAFSAVA 67
           LR S I + V + CL+  + Q    +  ++    Y +L  LK +V ++   A Y    + 
Sbjct: 12  LRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYNLLLLC 71

Query: 68  --CTWIR-----SLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACN 120
               W R     S +   W+ F  DQI  Y+T  +  A M    LA +G +   W + C+
Sbjct: 72  KHSIWSRKNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAVLAISGSEAFQWLKVCD 131

Query: 121 SFGKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPP 161
            F +FC ++                   ISAY+ F ++ P 
Sbjct: 132 KFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPK 172


>Glyma07g39680.1 
          Length = 201

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 17/171 (9%)

Query: 5   LKLLDSSLRFS-------VIPLSVASICLIVTNQQENSSYG---DLKYSNLMGLKYMVCI 54
           LK+LD  +R +        + L   +I L+VT+ Q    +      K++++  L ++V  
Sbjct: 21  LKVLDRRVRITELVLRCVSLGLGAVAIVLVVTDSQVKEFFSFQKKAKFTDMKALVFLVVA 80

Query: 55  SAIGACYAF-SAVAC--TWIRS--LVNK--VWLFFVSDQIMAYLTVTSAAALMEIVYLAY 107
           + +   Y+    + C  + IR   L NK   WL F  DQ+MAY+TV +  A ++   L  
Sbjct: 81  NGLTVGYSLIQGLRCVVSMIRGNVLFNKPFAWLIFSGDQVMAYVTVAAVVAALQSGVLGR 140

Query: 108 NGDQEVTWSEACNSFGKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVF 158
            G  E+ W + CN +GKFC++M                   ISA+  F ++
Sbjct: 141 TGQAELQWMKVCNMYGKFCNQMGEGIASAFVVSLSMVVLSCISAFSLFRLY 191


>Glyma17g01130.1 
          Length = 201

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 17/171 (9%)

Query: 5   LKLLDSSLRFS-------VIPLSVASICLIVTNQQENSSYG---DLKYSNLMGLKYMVCI 54
           LK+LD  +R +        + L V +I L+VT+ Q    +      K++++  L ++V  
Sbjct: 21  LKVLDRRVRITELVLRCVSLGLGVVAIVLVVTDSQVKEFFSFQKKAKFTDMKALVFLVVA 80

Query: 55  SAIGACYAF-SAVAC--TWIRS--LVNK--VWLFFVSDQIMAYLTVTSAAALMEIVYLAY 107
           + +   Y+    + C  + +R   L +K   WL F  DQ+MAY+TV + AA ++   L  
Sbjct: 81  NGLTVGYSLIQGLRCVVSMVRGNVLFSKPLAWLIFSGDQVMAYVTVAAVAAALQSGVLGR 140

Query: 108 NGDQEVTWSEACNSFGKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVF 158
            G  E+ W + CN +GKFC++M                   ISA+  F ++
Sbjct: 141 TGQAELQWMKVCNMYGKFCNQMGEGIASAFVVSLSMVVLSCISAFSLFRLY 191


>Glyma17g07210.1 
          Length = 180

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 11/161 (6%)

Query: 12  LRFSVIPLSVASICLIVTNQQENSSYGDLKYS----NLMGLKYMVCISAIGACYAFSAVA 67
           LR S I + V + CL+  + Q    +  ++      +L  LK +V +++  A Y    + 
Sbjct: 12  LRVSAILVLVLTACLVALDTQTKVVFLSIEKKATCRDLNALKILVYVTSASAGYNLLLLC 71

Query: 68  --CTWIR-----SLVNKVWLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACN 120
               W R     S +   W+ F+ DQI  Y+T  +  A M    LA  G     W + C+
Sbjct: 72  KHSIWSRKNFKGSYLCMAWICFLLDQIAVYMTFAANTAAMGAAMLAITGSDAFQWLKVCD 131

Query: 121 SFGKFCHKMKXXXXXXXXXXXXXXXXXXISAYRAFSVFEPP 161
            F +FC ++                   ISAY+ F ++ P 
Sbjct: 132 KFTRFCVQIGGALLCGYAASIIMALISTISAYQVFRMYSPK 172


>Glyma07g38090.1 
          Length = 188

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)

Query: 41  KYSNLMGLKYMVCISAIGACYAFSAVACTWIRSLVNK-----VW-LFFVSDQIMAYLTVT 94
           K+  +    Y +  +AI   YA    A + + +LVN+     +W L  V D  M  L  +
Sbjct: 69  KWHQMSAFVYFLVTNAIACTYA----AMSLLLALVNRGKSKGLWTLIAVLDTFMVALLFS 124

Query: 95  SAAALMEIVYLAYNGDQEVTWSEACNSFGKFCHKM 129
              A   +  L Y G+  V W++ CN FGKFC +M
Sbjct: 125 GNGAAAAVGILGYKGNSHVNWNKVCNVFGKFCDQM 159


>Glyma13g01100.2 
          Length = 155

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 36/83 (43%)

Query: 79  WLFFVSDQIMAYLTVTSAAALMEIVYLAYNGDQEVTWSEACNSFGKFCHKMKXXXXXXXX 138
           W+ F  DQI  Y+T  +  A M    LA +G +   W + C+ F +FC ++         
Sbjct: 65  WICFSLDQIAVYMTFAANTATMGAAVLAISGSEAFQWLKVCDKFTRFCVEIGGALLCGYA 124

Query: 139 XXXXXXXXXXISAYRAFSVFEPP 161
                     ISAY+ F ++ P 
Sbjct: 125 ASMLMALISTISAYKVFRMYSPK 147