Jatropha Genome Database

JcCA0154181.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154181.30 + phase: 0 
         (161 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g37190.1                                                       144   3e-35
Glyma14g37210.1                                                       134   4e-32
Glyma02g39110.1                                                       132   2e-31
Glyma16g22500.1                                                        73   1e-13
Glyma09g33130.1                                                        73   1e-13

>Glyma14g37190.1 
          Length = 322

 Score =  144 bits (364), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 68/134 (50%), Positives = 94/134 (70%), Gaps = 1/134 (0%)

Query: 29  ARNQSRPLHRRFPQLLATKTDLAVKQEDK-SVIEDEIEPLPEDLRPELMPRHVAIIMDGN 87
           ++ QS  + +R   +     D    ++D  S+ ++ +EPLP +L  E+MP+HVA+IMDGN
Sbjct: 41  SQTQSLIVSKRGSAIAKCHADSVTLRDDGVSLAQESLEPLPAELAAEMMPKHVAVIMDGN 100

Query: 88  GRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWTRPQVEVDFLMSL 147
           GRWA+ KG   S GH+AG ++L  +V+LC  WGIKVLTVFAFS DNW RP+VEVDFLM L
Sbjct: 101 GRWAKVKGLPPSAGHQAGVQSLRKMVRLCCSWGIKVLTVFAFSTDNWVRPKVEVDFLMRL 160

Query: 148 FEKSLKSEINNFVR 161
           FE+++ SE+  F R
Sbjct: 161 FERTINSEVQTFKR 174


>Glyma14g37210.1 
          Length = 307

 Score =  134 bits (337), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 75/157 (47%), Positives = 98/157 (62%), Gaps = 9/157 (5%)

Query: 4   LNLSLPISAYNTQTLQNPKC---FLSPNARNQSRPLHRRFPQLLATKTDLAVKQED-KSV 59
           L+L+LPI    T T  +P      LSP +  Q  P H       AT    A  ++D  S+
Sbjct: 2   LSLTLPIPLLKTLTPPSPNINNPSLSPYSHYQPLPKHSS-----ATAPPSATLRDDGTSL 56

Query: 60  IEDEIEPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQW 119
             D  EPLPE+L  ELMP+HVA+I+DG+GRWA+ +G  AS GH+AG + L  +V+LC  W
Sbjct: 57  AGDSPEPLPEELVAELMPKHVAVIIDGHGRWAKLRGLPASAGHQAGVQPLRTVVRLCCSW 116

Query: 120 GIKVLTVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEI 156
           GI+VLTVF  S +NW RP+VEVD LM LFE ++ S I
Sbjct: 117 GIQVLTVFVLSTENWFRPKVEVDSLMKLFETTINSSI 153


>Glyma02g39110.1 
          Length = 250

 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 58/97 (59%), Positives = 74/97 (76%)

Query: 65  EPLPEDLRPELMPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVL 124
           +P P +L  E+MP+HVA+IMDGNGRWA+ KG   S GH+AG ++L  +V+LC  WGIKVL
Sbjct: 9   DPFPAELAAEMMPKHVAVIMDGNGRWAKVKGLPPSAGHQAGVQSLRRMVRLCSSWGIKVL 68

Query: 125 TVFAFSCDNWTRPQVEVDFLMSLFEKSLKSEINNFVR 161
           TVFAFS DNW RP++E DFLM LFE ++ SE+  F R
Sbjct: 69  TVFAFSTDNWVRPKLEFDFLMRLFETTINSEVQAFKR 105


>Glyma16g22500.1 
          Length = 304

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 50/78 (64%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+A+++      GH+AG   L  I++ C++ G+K +TV+AFS DN+ 
Sbjct: 33  VPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGVKYVTVYAFSIDNFK 92

Query: 136 RPQVEVDFLMSLFEKSLK 153
           R   EV  LM L  + ++
Sbjct: 93  RKPNEVQSLMELMREKIE 110


>Glyma09g33130.1 
          Length = 362

 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 32/78 (41%), Positives = 50/78 (64%)

Query: 76  MPRHVAIIMDGNGRWARQKGGLASMGHEAGGRTLTDIVKLCWQWGIKVLTVFAFSCDNWT 135
           +P H+A IMDGN R+A+++      GH+AG   L  I++ C++ G+K +TV+AFS DN+ 
Sbjct: 33  VPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGVKYVTVYAFSIDNFK 92

Query: 136 RPQVEVDFLMSLFEKSLK 153
           R   EV  LM L  + ++
Sbjct: 93  RKPNEVQSLMELMREKIE 110