Jatropha Genome Database

JcCA0154181.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154181.20 - phase: 0 
         (567 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g37230.1                                                       795   0.0  
Glyma02g39130.1                                                       786   0.0  
Glyma17g11210.1                                                        77   6e-14
Glyma13g22390.1                                                        72   2e-12
Glyma13g22410.1                                                        67   4e-11
Glyma01g07420.1                                                        58   3e-08

>Glyma14g37230.1 
          Length = 561

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/454 (82%), Positives = 429/454 (94%), Gaps = 1/454 (0%)

Query: 68  SKKKGKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTITCPHRVA 127
           + +KGKAPITISLKKVCKVCKKPGHEAGFKGATY+DCPMKPCFLCKMPGHTT+TCPHRV+
Sbjct: 66  ANRKGKAPITISLKKVCKVCKKPGHEAGFKGATYVDCPMKPCFLCKMPGHTTLTCPHRVS 125

Query: 128 TEYGVIPAPQRNTHNPLEYVFQRQLRPHIPPIKPPFVVPDQVCCAVIRYHSRRVTCLEFH 187
           TE+GV+PAP+R T  PL+YVF+RQLRP +P IKP +V+PDQV CAVIRYHSRRVTCLEFH
Sbjct: 126 TEHGVVPAPRRKTCKPLDYVFERQLRPSLPSIKPKYVIPDQVNCAVIRYHSRRVTCLEFH 185

Query: 188 PTKNNVLLSGDKKGQVGVWDFEKVHEKMVYGNIHTCIVNNMRFKPSNDGTVYAASSDGTI 247
           PTKNN+LLSGDKKGQ+GVWDF KV+EK+VYGNIH+C+VNNMRF P+ND  VY+ASSDGTI
Sbjct: 186 PTKNNILLSGDKKGQLGVWDFGKVYEKVVYGNIHSCLVNNMRFNPTNDCMVYSASSDGTI 245

Query: 248 SCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDINSEKGVVLVADNFGFLYIVDMRSNS 307
           SCTD+ETGIS+S MNLNPDGWQGP++W+ML GMDINSEKG+VLVAD+FGFL++VDMRSN+
Sbjct: 246 SCTDLETGISSSPMNLNPDGWQGPNTWKMLNGMDINSEKGLVLVADSFGFLHMVDMRSNN 305

Query: 308 KTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAGSSLCDLVHKRVV 367
           ++G  ILIHKKG KVVG+HCNP+ P++ L+CGNDHFARIWD+R+++AGSSL DL HKRVV
Sbjct: 306 RSGDAILIHKKG-KVVGIHCNPIQPDIFLTCGNDHFARIWDLRQIKAGSSLYDLKHKRVV 364

Query: 368 NCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKD 427
           N AYFSP+SG+KILTTSQDNRLRVWDSIFGN+DSPSREIVHSHDFNRHLTPF+AEWDPKD
Sbjct: 365 NSAYFSPISGTKILTTSQDNRLRVWDSIFGNMDSPSREIVHSHDFNRHLTPFKAEWDPKD 424

Query: 428 PSESLAVIGRYISENYNGAALHPIDFIDTSNGQLVAEVMDPNITTITPVNKLHPRDDILA 487
           PSESLAV+GRYISENYNGAALHPIDFIDTS GQLVAEVMDPNITTI+PVNKLHPRDDILA
Sbjct: 425 PSESLAVVGRYISENYNGAALHPIDFIDTSTGQLVAEVMDPNITTISPVNKLHPRDDILA 484

Query: 488 SGSSRSLFIWKPKDKSELAEQKEDRQIVICGNAE 521
           +GSSRSLFIWKPK+KSEL E+K++R+IV+CG AE
Sbjct: 485 TGSSRSLFIWKPKEKSELVEEKDERKIVVCGKAE 518


>Glyma02g39130.1 
          Length = 556

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/454 (81%), Positives = 426/454 (93%), Gaps = 1/454 (0%)

Query: 68  SKKKGKAPITISLKKVCKVCKKPGHEAGFKGATYIDCPMKPCFLCKMPGHTTITCPHRVA 127
           + +KGKAPITISLKKVCKVCKKPGHEAGFKGA YIDCPMKPCFLCKMPGHTT+TCPHRV+
Sbjct: 60  ANRKGKAPITISLKKVCKVCKKPGHEAGFKGAAYIDCPMKPCFLCKMPGHTTLTCPHRVS 119

Query: 128 TEYGVIPAPQRNTHNPLEYVFQRQLRPHIPPIKPPFVVPDQVCCAVIRYHSRRVTCLEFH 187
           TE+GV+PAP+R    PLEYVF+RQLRP +P IKP +V+PDQV CAVIRYHSRR+TCLEFH
Sbjct: 120 TEHGVVPAPRRKACKPLEYVFERQLRPSLPSIKPKYVIPDQVNCAVIRYHSRRITCLEFH 179

Query: 188 PTKNNVLLSGDKKGQVGVWDFEKVHEKMVYGNIHTCIVNNMRFKPSNDGTVYAASSDGTI 247
           PTKNN+LLSGDKKGQ+GVWDF KV+EK+VYGNIH+C+VNNMRF P+ND  VY+ASSDGTI
Sbjct: 180 PTKNNILLSGDKKGQLGVWDFGKVYEKVVYGNIHSCLVNNMRFNPTNDCMVYSASSDGTI 239

Query: 248 SCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDINSEKGVVLVADNFGFLYIVDMRSNS 307
           SCTD+ETGIS+S +NLNPDGWQGP++W+ML G+DINSEKG+VLVAD+FGFL++VD+RSN+
Sbjct: 240 SCTDLETGISSSPLNLNPDGWQGPNTWKMLNGLDINSEKGLVLVADSFGFLHMVDIRSNN 299

Query: 308 KTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAGSSLCDLVHKRVV 367
           ++G  ILIHKKG KVVG+HCNP+ P++ L+CGNDHFARIWD+R++EAGSSL DL H RVV
Sbjct: 300 RSGDAILIHKKG-KVVGIHCNPIQPDIFLTCGNDHFARIWDLRQIEAGSSLYDLKHTRVV 358

Query: 368 NCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNRHLTPFRAEWDPKD 427
           N AYFSP+SG+KILTTSQDNRLRVWDSIFGN+DSPSREIVHSHDFNRHLTPF+AEWDPKD
Sbjct: 359 NSAYFSPISGTKILTTSQDNRLRVWDSIFGNVDSPSREIVHSHDFNRHLTPFKAEWDPKD 418

Query: 428 PSESLAVIGRYISENYNGAALHPIDFIDTSNGQLVAEVMDPNITTITPVNKLHPRDDILA 487
           PSESLAV+GRYISENYNGAALHPIDFIDTS GQLVAEVMDPNITTI+PVNKLHPRDDILA
Sbjct: 419 PSESLAVVGRYISENYNGAALHPIDFIDTSTGQLVAEVMDPNITTISPVNKLHPRDDILA 478

Query: 488 SGSSRSLFIWKPKDKSELAEQKEDRQIVICGNAE 521
           +GSSRSLFIWKPK+KSEL E+K++++IV+CG AE
Sbjct: 479 TGSSRSLFIWKPKEKSELVEEKDEQKIVVCGKAE 512


>Glyma17g11210.1 
          Length = 460

 Score = 76.6 bits (187), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 119/254 (46%), Gaps = 27/254 (10%)

Query: 180 RVTCLEFHPTKNNVLLS-GDKKGQVGVWDF--EKVHEKMVYGNIHTCIVNNMRFKPSNDG 236
           R+T L F P+ +  +++ G+K G VG W+    +VH   +Y   H   ++ +  +P    
Sbjct: 165 RITSLRFFPSSSVKMVAVGNKFGNVGFWNVGGSEVH---LY-RPHRAPISGILIQPHCFS 220

Query: 237 TVYAASSDGTISCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDI-NSEKGVVLVADNF 295
            +Y +  DG +   D+E  I   +   +            +Y + +  +E   + +A+ +
Sbjct: 221 KIYTSCYDGILRLMDVEKEIFDLVFECDES----------IYALSLPTNETNCLYLAEGY 270

Query: 296 GFLYIVDMRSNSKTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAG 355
           G L I D R   ++   +L H+     +  +C   +P ++ +   D  A  WD+R  +  
Sbjct: 271 GGLTIWDNRIGKRSSHWVL-HESRINTIDFNCE--NPHIVATSSTDGTACTWDLRYTDGD 327

Query: 356 S--SLCDLVHKRVVNCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFN 413
              +L    HKR V  AYFSP SG  + TTS DN + ++  +  NL+  +  I H++   
Sbjct: 328 KLRALRTFTHKRSVQSAYFSP-SGCSLATTSLDNTIGIYSGV--NLEDAA-VINHNNLTG 383

Query: 414 RHLTPFRAEWDPKD 427
           R L+ FRA+W   D
Sbjct: 384 RWLSTFRAKWGWDD 397


>Glyma13g22390.1 
          Length = 434

 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 25/253 (9%)

Query: 180 RVTCLEFHP-TKNNVLLSGDKKGQVGVWDFEKVHEKMVYGNIHTCIVNNMRFKPSNDGTV 238
           R+T + F P T   ++ +G++ G +G W+  +  E  +Y + H   ++ +  +P     +
Sbjct: 139 RITDVRFFPSTSVKMIAAGNRFGHIGFWNVGQ-REVHLY-HPHLAQISGILIQPHCFSKI 196

Query: 239 YAASSDGTISCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDI-NSEKGVVLVADNFGF 297
           Y +  DGT+   D E  I     +L  D      S   ++ +    +E   +  A+ +G 
Sbjct: 197 YTSCYDGTVRLMDAEKEI----FDLVVD------SDECIFALSQPTNEANCLYFAEGYGG 246

Query: 298 LYIVDMRSNSKTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAGSS 357
           L I D R   ++   +L HK+    V  +C   +P ++ +  +D  A  WD+R  + G  
Sbjct: 247 LTIWDNRIGKRSSHWVL-HKRRINTVDFNCE--NPHIVATSCSDGTACTWDLRYTD-GDK 302

Query: 358 LCDL---VHKRVVNCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNR 414
           L  L    H R +  AYFSP SGS +  TS D  + ++  +  NL+  +  I H++  + 
Sbjct: 303 LTPLRIFTHDRALQSAYFSP-SGSSLAITSMDTTIGIYSGV--NLEDATL-IYHNNQNST 358

Query: 415 HLTPFRAEWDPKD 427
            L+ FRA+W   D
Sbjct: 359 RLSTFRAKWGWDD 371


>Glyma13g22410.1 
          Length = 459

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 112/252 (44%), Gaps = 23/252 (9%)

Query: 180 RVTCLEFHPTKNNVLLS-GDKKGQVGVWDFEKVHEKMVYGNIHTCIVNNMRFKPSNDGTV 238
           R+T   F P+ +  +++ G+  G VG W+  +  E  +Y   H   ++ +  +P     +
Sbjct: 164 RITSARFFPSSSVKMIAVGNTFGNVGFWNVGQ-SEVHLY-RPHRAPISGILIQPHCLSKI 221

Query: 239 YAASSDGTISCTDMETGISTSLMNLNPDGWQGPSSWRMLYGMDI-NSEKGVVLVADNFGF 297
           Y +  DG +   D E  I   +   +            ++ +    +E   + +A+  G 
Sbjct: 222 YTSCYDGILRLMDAEKEIFDLVFESDES----------IFALSQPTNETNCLYLAEGSGG 271

Query: 298 LYIVDMRSNSKTGQPILIHKKGSKVVGLHCNPVHPELLLSCGNDHFARIWDMRRLEAG-- 355
           L I D R   +    +L H+     +  +C   +P +  +   D  A  WD+R  +    
Sbjct: 272 LTIWDNRIGKRLSHWVL-HESRINTIDFNCK--NPHIAATSSTDGTACTWDLRYTDGDKL 328

Query: 356 SSLCDLVHKRVVNCAYFSPLSGSKILTTSQDNRLRVWDSIFGNLDSPSREIVHSHDFNRH 415
           ++L    HKR V  AYFSP SG  + TTS DN + ++  +  N++  +  I H++   R 
Sbjct: 329 TALRTFTHKRSVQSAYFSP-SGCSLATTSLDNTIAIYSGV--NMEDAA-VINHNNQTGRW 384

Query: 416 LTPFRAEWDPKD 427
           L+ FRA+W   D
Sbjct: 385 LSTFRAKWGWDD 396


>Glyma01g07420.1 
          Length = 151

 Score = 57.8 bits (138), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 4/55 (7%)

Query: 219 NIHTCIVNNMRFKP----SNDGTVYAASSDGTISCTDMETGISTSLMNLNPDGWQ 269
           ++HT  +   +  P     ND  VY+ASS+GTISCTD+ET IS+S +  NPDGWQ
Sbjct: 97  SVHTSSLITTKLLPCLIHENDCMVYSASSNGTISCTDLETVISSSPVIRNPDGWQ 151