Jatropha Genome Database

JcCA0154091.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154091.30 + phase: 0 
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g30940.1                                                       113   1e-25
Glyma14g38460.1                                                       108   5e-24
Glyma02g40270.1                                                       104   5e-23
Glyma18g05880.1                                                        69   3e-12
Glyma04g40010.1                                                        64   1e-10
Glyma15g03350.1                                                        59   4e-09
Glyma13g42030.1                                                        58   8e-09
Glyma12g05520.1                                                        52   4e-07
Glyma02g09140.1                                                        50   1e-06
Glyma11g13510.1                                                        50   2e-06

>Glyma11g30940.1 
          Length = 385

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/149 (47%), Positives = 88/149 (59%), Gaps = 17/149 (11%)

Query: 32  SGHRRAHSEVHFRLQEDL-DLV-TDPFEGPSGS-SFDELGSEDDLFCTYMDIEKLGSRPE 88
           S HRRA SEV FRL ED+ DL  +DPF G S + SF+E+GSEDDLF TY+D+EKL     
Sbjct: 50  SHHRRAQSEVSFRLPEDMMDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLSGG-- 107

Query: 89  EGPSGLKLDNAVNGLTDXXXXXXXXXXXXXXDADEEKNV---RPRHRYSNSVDGSS---- 141
                          +D              D ++  +    RPRHR+S+SVDGS+    
Sbjct: 108 -----ANGAGRGGNGSDQSGYGNGAGTSGHNDGEKSSSAAAARPRHRHSSSVDGSTSTCM 162

Query: 142 FLESIEAKKAMAPDKLAELWTLDPKRAKR 170
           F E ++AKKAM PDKLAELW +DPKRAKR
Sbjct: 163 FGEIMDAKKAMPPDKLAELWNIDPKRAKR 191


>Glyma14g38460.1 
          Length = 362

 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/146 (52%), Positives = 91/146 (62%), Gaps = 28/146 (19%)

Query: 30  RSSG--HRRAHSEVHFRLQEDL-DLV-TDPFEG-PSGSSFDELGSEDDLFCTYMDIEKLG 84
           RS G  HRRAHSEV FRL +D+ DL  +DPF G  S +S +E+GSEDDLF TY+D++KLG
Sbjct: 46  RSGGPHHRRAHSEVSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLG 105

Query: 85  SRPEEGPSGLKLDNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGSSFLE 144
                G SG   D    G T                  E+   RPRHR+S+SVD   F E
Sbjct: 106 GANGSGASGNGADP--TGET------------------EKSPARPRHRHSSSVD---FGE 142

Query: 145 SIEAKKAMAPDKLAELWTLDPKRAKR 170
            ++AKKAM PDKLAELWT+DPKRAKR
Sbjct: 143 IMDAKKAMPPDKLAELWTIDPKRAKR 168


>Glyma02g40270.1 
          Length = 364

 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 87/146 (59%), Gaps = 28/146 (19%)

Query: 30  RSSG--HRRAHSEVHFRLQEDL-DLV-TDPFEG-PSGSSFDELGSEDDLFCTYMDIEKLG 84
           RS G  HRRAHSE+ FRL +D+ DL  +DPF G  S +S +E+GSEDDLF TY+D++KL 
Sbjct: 48  RSGGPHHRRAHSEMSFRLPDDMMDLSPSDPFAGGSSTASMEEIGSEDDLFSTYIDVDKLS 107

Query: 85  SRPEEGPSGLKLDNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGSSFLE 144
                G +G   D                         E+   RPRHR S+SVD   F E
Sbjct: 108 GANGSGGAGNGAD--------------------PTGEREKSPARPRHRQSSSVD---FGE 144

Query: 145 SIEAKKAMAPDKLAELWTLDPKRAKR 170
            ++AKKAM PDKLAELWT+DPKRAKR
Sbjct: 145 IMDAKKAMPPDKLAELWTIDPKRAKR 170


>Glyma18g05880.1 
          Length = 363

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/57 (64%), Positives = 46/57 (80%), Gaps = 3/57 (5%)

Query: 32 SGHRRAHSEVHFRLQEDL-DLV-TDPFEGPSGS-SFDELGSEDDLFCTYMDIEKLGS 85
          S HRRAHSEV FRL +D+ DL  +DPF G S + SF+E+GSEDDLF TY+D+EKLG+
Sbjct: 32 SHHRRAHSEVSFRLPDDMIDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLGA 88


>Glyma04g40010.1 
          Length = 296

 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 56/146 (38%)

Query: 32  SGHRRAHSEVHFRLQEDLDLVTD-----PFEGPSGSSFDELGSEDDLFCTYMDIEKLGSR 86
           S HRR+ SE+HFR+ +D DL  D      F+ P+                   ++  GS 
Sbjct: 4   SHHRRSQSEMHFRISDDFDLEVDLSPSHHFQYPAPL-----------------LQDSGSI 46

Query: 87  PEEGPSGLKLDNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGS--SFLE 144
           P+                                + + +  R  H+ SNS D S  S ++
Sbjct: 47  PQ--------------------------------SPQPETARSAHQRSNSADASYSSLVD 74

Query: 145 SIEAKKAMAPDKLAELWTLDPKRAKR 170
            IEAKKA++PDKLAELWT DPKRAKR
Sbjct: 75  GIEAKKALSPDKLAELWTADPKRAKR 100


>Glyma15g03350.1 
          Length = 420

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 21/158 (13%)

Query: 30  RSSGHRRAHSEVHFRLQEDL--DLVTDPFEGPSGSSFDELGSEDDLFCTYMDIEKLGSRP 87
           R+ GHRRAHSE+   L +D+  D       G  G SF +  +E+DL   Y+D++K  S  
Sbjct: 80  RNRGHRRAHSEI-LTLPDDISFDSDLGVVGGGDGPSFSD-DAEEDLLSMYLDMDKFNS-- 135

Query: 88  EEGPSGLKL---DNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGSSFLE 144
               S  ++    NAV                        +  R RH++S S+DGS+ ++
Sbjct: 136 SSATSTFQMVEPSNAVGASASTPASGAPTSSTENVVIGTNERPRVRHQHSQSMDGSTTIK 195

Query: 145 ------------SIEAKKAMAPDKLAELWTLDPKRAKR 170
                       + ++KKAM+  KLAEL  +DPKRAKR
Sbjct: 196 PEMLVSGSEDMSAADSKKAMSAAKLAELALIDPKRAKR 233


>Glyma13g42030.1 
          Length = 428

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 27/161 (16%)

Query: 30  RSSGHRRAHSEVHFRLQEDLDL-----VTDPFEGPSGSSFDELGSEDDLFCTYMDIEKLG 84
           R+ GHRRAHSE+   L +D+       V    +GPS S      +E+DL   Y+D++K  
Sbjct: 81  RNRGHRRAHSEI-LTLPDDISFDSDLGVVGAGDGPSFSD----DAEEDLLSMYLDMDKFN 135

Query: 85  SRPEEGPSGLKL---DNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGSS 141
           S      S  ++    NAV                        +  R RH++S S+DGS+
Sbjct: 136 S--SSATSTFQMGEPSNAVGASASTPGSGAPNYSAENVVFGTIERPRVRHQHSQSMDGST 193

Query: 142 FLE------------SIEAKKAMAPDKLAELWTLDPKRAKR 170
            ++            + ++KKA++  KLAEL  +DPKRAKR
Sbjct: 194 TIKPELLVSGSEDMSAADSKKAISAAKLAELALIDPKRAKR 234


>Glyma12g05520.1 
          Length = 398

 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 14/61 (22%)

Query: 124 EKNVRPRHRYSNSVDGSSFLE--------------SIEAKKAMAPDKLAELWTLDPKRAK 169
           E++ R RH++S+S+DGS  LE               I+ KKAM+ DKLAEL  +DPKRAK
Sbjct: 98  ERSTRVRHQHSHSMDGSIHLEMLLSAASAADDVSGGIDTKKAMSADKLAELALVDPKRAK 157

Query: 170 R 170
           R
Sbjct: 158 R 158


>Glyma02g09140.1 
          Length = 330

 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 69/166 (41%), Gaps = 34/166 (20%)

Query: 30  RSSGHRRAHSEVHFRLQEDLD--LVTDPFEGPSGSSFD----------ELGSEDDLFCTY 77
           R S HRR+HS+  FR   + D  L+ DP      S FD                 L    
Sbjct: 21  RGSHHRRSHSDTSFRFAANFDDLLLFDP------SDFDISGLPSPLPLPSPVSAGLVPMS 74

Query: 78  MDIEKLGSRPEEGPSGLKLDNAVNGLTDXX----XXXXXXXXXXXXDADEEKNVRPRHRY 133
           +D ++ G +P   P+G      +  L+                        +     HR+
Sbjct: 75  VDSDESGKQPR--PAGASAGGHLRSLSVDSDFFDGLGFGGDERGAGKGGGGERRVGHHRH 132

Query: 134 SNSVDGSSFLESIEA---------KKAMAPDKLAELWTLDPKRAKR 170
           SNS+DGSS   S EA         KKAMAPDKLAEL  +DPKRAKR
Sbjct: 133 SNSMDGSS-TTSFEADSAMIMDGVKKAMAPDKLAELALMDPKRAKR 177


>Glyma11g13510.1 
          Length = 385

 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 74/158 (46%), Gaps = 39/158 (24%)

Query: 30  RSSGHRRAHSEVHFRLQEDLDLVTDPFEGPSGSSFD-ELGSEDDLFCTYMDIEKLGSRPE 88
           ++ GHRRAHSE+   L +DL             +FD +L  ++DL   Y+  ++L S P 
Sbjct: 48  KNRGHRRAHSEI-ITLPDDL-------------TFDVDLPDDNDLLSIYLQFDQLDSSPL 93

Query: 89  EGPSGLKLDNAVNGLTDXXXXXXXXXXXXXXDADEEKNVRPRHRYSNSVDGS---SFLES 145
             P   + ++  N                  + + E+  R RH++S S+DGS     L S
Sbjct: 94  PLPPPPQHNSIAN--------NNNNNNNKNNNNNNERPTRVRHQHSLSMDGSIHPDMLLS 145

Query: 146 -------------IEAKKAMAPDKLAELWTLDPKRAKR 170
                        I+ KKAM+ DKLAEL  +DPKRAKR
Sbjct: 146 ATAAAADDVSGGGIDTKKAMSADKLAELALVDPKRAKR 183