Jatropha Genome Database

JcCA0154091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154091.10 + phase: 2 /partial
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g40030.1                                                       174   3e-44
Glyma06g14820.2                                                       173   4e-44
Glyma06g14820.3                                                       173   4e-44
Glyma06g14820.1                                                       173   5e-44
Glyma06g14820.4                                                       162   9e-41

>Glyma04g40030.1 
          Length = 209

 Score =  174 bits (440), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 86/138 (62%), Positives = 102/138 (73%)

Query: 1   DDFFEALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXX 60
           D+FF ALI+APVEKF+R+VVIKEIKG+QYGVQ+E+AVRDR                    
Sbjct: 72  DEFFNALISAPVEKFIRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIE 131

Query: 61  FFQSKYFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGV 120
           FFQSKYFKK S+IT+HFP  S TAEI  S EGKE+SK  +ENANVVE +KKWYLGG+  V
Sbjct: 132 FFQSKYFKKHSVITYHFPTNSATAEIVVSLEGKEDSKYVIENANVVEAVKKWYLGGSSAV 191

Query: 121 SATTITSLANTLSAELSK 138
           S++TI SLA+T S ELSK
Sbjct: 192 SSSTIRSLASTFSQELSK 209


>Glyma06g14820.2 
          Length = 186

 Score =  173 bits (439), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 87/138 (63%), Positives = 103/138 (74%)

Query: 1   DDFFEALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXX 60
           ++FF ALI+APVEKF+R+VVIKEIKG+QYGVQ+E+AVRDR                    
Sbjct: 49  EEFFNALISAPVEKFIRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIE 108

Query: 61  FFQSKYFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGV 120
           FFQSKYFKK S+IT+HFPA S TAEI  S EGKE+SK  +ENANVVE IKKWYLGG+  V
Sbjct: 109 FFQSKYFKKLSVITYHFPANSATAEIVVSLEGKEDSKYVIENANVVEAIKKWYLGGSSAV 168

Query: 121 SATTITSLANTLSAELSK 138
           S++TI SLA+T S ELSK
Sbjct: 169 SSSTIQSLASTFSQELSK 186


>Glyma06g14820.3 
          Length = 177

 Score =  173 bits (439), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 87/138 (63%), Positives = 103/138 (74%)

Query: 1   DDFFEALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXX 60
           ++FF ALI+APVEKF+R+VVIKEIKG+QYGVQ+E+AVRDR                    
Sbjct: 40  EEFFNALISAPVEKFIRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIE 99

Query: 61  FFQSKYFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGV 120
           FFQSKYFKK S+IT+HFPA S TAEI  S EGKE+SK  +ENANVVE IKKWYLGG+  V
Sbjct: 100 FFQSKYFKKLSVITYHFPANSATAEIVVSLEGKEDSKYVIENANVVEAIKKWYLGGSSAV 159

Query: 121 SATTITSLANTLSAELSK 138
           S++TI SLA+T S ELSK
Sbjct: 160 SSSTIQSLASTFSQELSK 177


>Glyma06g14820.1 
          Length = 209

 Score =  173 bits (439), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/138 (63%), Positives = 103/138 (74%)

Query: 1   DDFFEALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXX 60
           ++FF ALI+APVEKF+R+VVIKEIKG+QYGVQ+E+AVRDR                    
Sbjct: 72  EEFFNALISAPVEKFIRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIE 131

Query: 61  FFQSKYFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGV 120
           FFQSKYFKK S+IT+HFPA S TAEI  S EGKE+SK  +ENANVVE IKKWYLGG+  V
Sbjct: 132 FFQSKYFKKLSVITYHFPANSATAEIVVSLEGKEDSKYVIENANVVEAIKKWYLGGSSAV 191

Query: 121 SATTITSLANTLSAELSK 138
           S++TI SLA+T S ELSK
Sbjct: 192 SSSTIQSLASTFSQELSK 209


>Glyma06g14820.4 
          Length = 140

 Score =  162 bits (410), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 81/133 (60%), Positives = 96/133 (72%)

Query: 6   ALIAAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRXXXXXXXXXXXXXXXXXXXXFFQSK 65
           + +  PVEKF+R+VVIKEIKG+QYGVQ+E+AVRDR                    FFQSK
Sbjct: 8   SFLVTPVEKFIRLVVIKEIKGAQYGVQIETAVRDRLAAEDKYEEEEEEALEKVIEFFQSK 67

Query: 66  YFKKDSIITFHFPATSPTAEIAFSTEGKEESKLKVENANVVEMIKKWYLGGTRGVSATTI 125
           YFKK S+IT+HFPA S TAEI  S EGKE+SK  +ENANVVE IKKWYLGG+  VS++TI
Sbjct: 68  YFKKLSVITYHFPANSATAEIVVSLEGKEDSKYVIENANVVEAIKKWYLGGSSAVSSSTI 127

Query: 126 TSLANTLSAELSK 138
            SLA+T S ELSK
Sbjct: 128 QSLASTFSQELSK 140