Jatropha Genome Database

JcCA0154071.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0154071.20 - phase: 0 
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g39440.1                                                       120   8e-28
Glyma03g36780.1                                                       117   1e-26

>Glyma19g39440.1 
          Length = 217

 Score =  120 bits (301), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 86/165 (52%), Gaps = 1/165 (0%)

Query: 24  MKKKKNMMRLGGPALSLEAFANAKSTRNKYNPALIKKQREFYKNAKYVSKFKKKLRQQNQ 83
           M KKKN+ RLGG  LSL+AFANAKS  N YNPA+IKKQREFYKNAK V+KFKK ++QQNQ
Sbjct: 48  MTKKKNISRLGGSGLSLDAFANAKSKNNLYNPAIIKKQREFYKNAKNVNKFKKLVKQQNQ 107

Query: 84  QTETSSVVTNLEDNNETGXXXXXXXXXXXXXXXXXXXXXXXXXQHXXXXXXXXXXXXFIX 143
           Q +  S+   L++N                             QH             + 
Sbjct: 108 QND-PSLAQRLKENVNETEENKDKSERRKRKNSALSLEELYKKQHEEKEKERMEKEAVLR 166

Query: 144 XXXXXXXXXXXXXXXXXXXMFKKTRHGQPVMKYRIEHLLQTIQGS 188
                              M KKTR GQPVMKYRIEHLL+TIQGS
Sbjct: 167 VKKEDREQAEAQRKAMREKMLKKTRKGQPVMKYRIEHLLETIQGS 211


>Glyma03g36780.1 
          Length = 191

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/160 (45%), Positives = 82/160 (51%), Gaps = 1/160 (0%)

Query: 29  NMMRLGGPALSLEAFANAKSTRNKYNPALIKKQREFYKNAKYVSKFKKKLRQQNQQTETS 88
           N+ RLGG  LSL AFANAK   N YNPA+IKKQREFYKNAK V+KFKK ++QQNQQ E S
Sbjct: 24  NVSRLGGSGLSLNAFANAKFKNNHYNPAIIKKQREFYKNAKNVNKFKKLVKQQNQQNEPS 83

Query: 89  SVVTNLEDNNETGXXXXXXXXXXXXXXXXXXXXXXXXXQHXXXXXXXXXXXXFIXXXXXX 148
               ++E+ NET                          QH             +      
Sbjct: 84  LAQRHIENVNET-EENKDDSERRKRKNSALSLEELYKKQHEEKEKEIMEREAVLRVKKEE 142

Query: 149 XXXXXXXXXXXXXXMFKKTRHGQPVMKYRIEHLLQTIQGS 188
                         M KKTR GQPVMKYRIEHLL+TIQGS
Sbjct: 143 REQAEARRKAMREKMLKKTRKGQPVMKYRIEHLLETIQGS 182