Jatropha Genome Database

JcCA0153841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153841.10 + phase: 0 
         (225 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g26610.1                                                       330   6e-91
Glyma20g26600.1                                                       329   2e-90
Glyma10g40720.1                                                       304   4e-83
Glyma16g33970.1                                                       265   4e-71
Glyma16g33980.1                                                       226   2e-59
Glyma01g45510.1                                                       183   1e-46
Glyma16g33960.1                                                        85   5e-17
Glyma20g26590.1                                                        75   8e-14
Glyma18g12760.1                                                        50   2e-06

>Glyma20g26610.1 
          Length = 225

 Score =  330 bits (847), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 151/217 (69%), Positives = 177/217 (81%)

Query: 8   LSLLVTLATIQGNHAVDYTVTNTATSTAGGARFTTDIGEDYAKKTLSAATDFIWRVFQQV 67
           L  LV L+ +   H V+YTVTN A ST GG  F   IG +YAK+TL +AT FIWR+FQQ 
Sbjct: 6   LCFLVFLSALHATHGVEYTVTNNALSTPGGVAFRDKIGAEYAKRTLDSATQFIWRIFQQN 65

Query: 68  NAEDRKDVQQVSLFIDDMDGVAYASNNEIHVSANYIGNYSGDLVREFSGVIYHEMTHIWQ 127
           N  DRK+VQ+VSLF+DDMDGVAY SNN+IH+SA Y+GN  GD+  E +GV+YHEM H+WQ
Sbjct: 66  NPSDRKNVQKVSLFVDDMDGVAYTSNNQIHLSARYVGNNKGDVKTEITGVLYHEMVHVWQ 125

Query: 128 WNGNGQTPVGLIEGIADFVRLKANYAPSHWVQPGQGDKWDQGYDVTARFLDYCNDLRNGF 187
           W+GNG+ P GLIEGIAD+VRLKANYAPSHWV+ GQG KWDQGYDVTARFLDYC+ L++GF
Sbjct: 126 WSGNGRAPGGLIEGIADYVRLKANYAPSHWVKAGQGQKWDQGYDVTARFLDYCDSLKSGF 185

Query: 188 VAELNKKMRTGYSNQYFVDLLGKSVDQLWSDYKAKYA 224
           VA+LNK MRTGYS+QYFV LLGK VDQLW DYKAKY 
Sbjct: 186 VAQLNKLMRTGYSDQYFVQLLGKPVDQLWRDYKAKYG 222


>Glyma20g26600.1 
          Length = 225

 Score =  329 bits (843), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 154/223 (69%), Positives = 181/223 (81%)

Query: 2   FAQAFLLSLLVTLATIQGNHAVDYTVTNTATSTAGGARFTTDIGEDYAKKTLSAATDFIW 61
            A   L  L+   A +QG  AVDYTVTN A ST+GG RF   IG+DYAK+TL +AT FIW
Sbjct: 1   MAMRSLCFLVFLAAAMQGTLAVDYTVTNNALSTSGGVRFRDAIGDDYAKQTLDSATQFIW 60

Query: 62  RVFQQVNAEDRKDVQQVSLFIDDMDGVAYASNNEIHVSANYIGNYSGDLVREFSGVIYHE 121
            V QQ    DRKDVQ+V+LF+DDMDGVAY SN+EIH+SA Y+ +YSGDL  E +GV+YHE
Sbjct: 61  GVLQQNAPADRKDVQKVNLFVDDMDGVAYTSNDEIHLSARYVNDYSGDLKTEITGVLYHE 120

Query: 122 MTHIWQWNGNGQTPVGLIEGIADFVRLKANYAPSHWVQPGQGDKWDQGYDVTARFLDYCN 181
           M H+WQWNGNGQTP GLIEGIAD+VRLKANYAPSHWV+ GQG+KWDQGYDVTA FLDYC+
Sbjct: 121 MVHVWQWNGNGQTPSGLIEGIADYVRLKANYAPSHWVKAGQGEKWDQGYDVTAHFLDYCD 180

Query: 182 DLRNGFVAELNKKMRTGYSNQYFVDLLGKSVDQLWSDYKAKYA 224
            L++GFVA+LN++MR GYS+Q FV LLGK+VDQLW DYKAKY 
Sbjct: 181 SLKSGFVAQLNQQMRDGYSDQLFVQLLGKTVDQLWQDYKAKYG 223


>Glyma10g40720.1 
          Length = 230

 Score =  304 bits (779), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 144/228 (63%), Positives = 177/228 (77%), Gaps = 5/228 (2%)

Query: 1   MFAQAFLLSLLVTLATIQGNHAVDYTVTNTATSTAGGARFTTDIGEDYAKKTLSAATDFI 60
           M       S+ +  A +QG  AV+Y+VTN A ST GG RF   IG++YAK+TL +AT FI
Sbjct: 1   MMMHVLCFSVFLA-AAMQGTLAVEYSVTNNALSTPGGVRFRDAIGDEYAKQTLDSATQFI 59

Query: 61  WRVFQQVNAEDRKDVQQVSLFIDDM---DGV-AYASNNEIHVSANYIGNYSGDLVREFSG 116
           W VFQQ    DRKD+Q+++LF++D    +GV AY S +EIHV A Y+ +Y GD+  E +G
Sbjct: 60  WGVFQQNAPADRKDIQKINLFVEDRVVPNGVVAYTSKDEIHVIAKYVNDYGGDVKTEITG 119

Query: 117 VIYHEMTHIWQWNGNGQTPVGLIEGIADFVRLKANYAPSHWVQPGQGDKWDQGYDVTARF 176
           V+YHEM H+WQWNGNGQ P GLIEGIAD+VRLKANYAPSHW + G+G KWDQGYDVTARF
Sbjct: 120 VLYHEMVHVWQWNGNGQAPSGLIEGIADYVRLKANYAPSHWKKAGEGQKWDQGYDVTARF 179

Query: 177 LDYCNDLRNGFVAELNKKMRTGYSNQYFVDLLGKSVDQLWSDYKAKYA 224
           LDYCN L++GFVA+LNK+MRTGYS+Q+FV LLGK+VDQLW DYKAKY 
Sbjct: 180 LDYCNTLKSGFVAQLNKQMRTGYSDQFFVQLLGKTVDQLWQDYKAKYG 227


>Glyma16g33970.1 
          Length = 207

 Score =  265 bits (676), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 120/201 (59%), Positives = 153/201 (76%), Gaps = 1/201 (0%)

Query: 25  YTVTNTATSTAGGARFTTDIGEDYAKKTLSAATDFIWRVFQQVNAEDRKDVQQVSLFIDD 84
           +TV N A +T GG RF   IG +YA +TL +AT FIW +FQQ N  DRK VQ+VSLF+DD
Sbjct: 4   FTVINNALTTLGGVRFRDKIGAEYANQTLDSATQFIWEIFQQNNPSDRKSVQKVSLFVDD 63

Query: 85  MDGVAYASNNEIHVSANYIGNYSG-DLVREFSGVIYHEMTHIWQWNGNGQTPVGLIEGIA 143
           MDG+AY   NEIHVSA Y+  YSG D+ RE +GV++H++ ++WQW GNG+ P GL  GIA
Sbjct: 64  MDGIAYTRKNEIHVSARYVNGYSGGDVKREITGVLFHQVCYVWQWKGNGKAPGGLTGGIA 123

Query: 144 DFVRLKANYAPSHWVQPGQGDKWDQGYDVTARFLDYCNDLRNGFVAELNKKMRTGYSNQY 203
           DFVRLKANYA SHW +PGQG KW++GY++TA FLDYC+ L++GFV +LN+ MRT YS+++
Sbjct: 124 DFVRLKANYAASHWRKPGQGQKWNEGYEITAHFLDYCDSLKSGFVGQLNQWMRTDYSDEF 183

Query: 204 FVDLLGKSVDQLWSDYKAKYA 224
           F  LL K V+ LW DYKA Y 
Sbjct: 184 FFLLLAKPVNHLWRDYKAMYG 204


>Glyma16g33980.1 
          Length = 811

 Score =  226 bits (575), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 104/200 (52%), Positives = 134/200 (67%), Gaps = 26/200 (13%)

Query: 15  ATIQGNHAVDYTVTNTATSTAGGARFTTDIGEDYAKKTLSAATDFIWRVFQQVNAEDRKD 74
           AT Q      +TV N A +T GG RF   IG +YA +TL  AT F+WR+FQQ N  DRK+
Sbjct: 567 ATKQETQGYKFTVINNALTTPGGVRFRDKIGAEYANRTLELATQFVWRIFQQKNPSDRKN 626

Query: 75  VQQVSLFIDDMDGVAYASNNEIHVSANYIGNYSGDLVREFSGVIYHEMTHIWQWNGNGQT 134
           VQ+VSL +DDM+                          E +GV++H++ ++WQW GNG+ 
Sbjct: 627 VQKVSLVVDDME--------------------------EITGVLFHQVCYVWQWYGNGEA 660

Query: 135 PVGLIEGIADFVRLKANYAPSHWVQPGQGDKWDQGYDVTARFLDYCNDLRNGFVAELNKK 194
           P GLI GIADFVRLKANYA SHW +PGQG +WD+GYD+TA FLDYC+ L++GFVA+LN+ 
Sbjct: 661 PGGLIGGIADFVRLKANYAASHWRKPGQGQRWDEGYDITAHFLDYCDSLKSGFVAQLNQL 720

Query: 195 MRTGYSNQYFVDLLGKSVDQ 214
           MRTGYS+Q+FV LLGK   +
Sbjct: 721 MRTGYSDQFFVQLLGKPFKE 740


>Glyma01g45510.1 
          Length = 173

 Score =  183 bits (465), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 95/197 (48%), Positives = 124/197 (62%), Gaps = 33/197 (16%)

Query: 7   LLSLLVTLATIQGNHAVDYTVTNTATSTAGGARFTTDIGEDYAKKTLSAATDFIWRVFQQ 66
           LL L++TLA       V+Y ++N A S+ GG  F   +G DYAK+TL +A DF  ++F Q
Sbjct: 1   LLCLVLTLA-------VEYVLSNNAGSSTGGKMFEKQVGADYAKQTLDSAADFTLKLFHQ 53

Query: 67  VNAEDRKDVQQVSLFIDDMDG--------VAYASNNEIHVSANYIGNYSGDLVREFSGVI 118
               DRK+VQQV+L +++MDG        +AY SN+EIH S+++I  +  D         
Sbjct: 54  STVADRKNVQQVNLIVENMDGLHLYVSQQIAYCSNDEIHESSSFIERFPRD--------- 104

Query: 119 YHEMTHIWQWNGNGQTPVGLIEGIADFVRLKANYAPSHWVQPGQGDKWDQGYDVTARFLD 178
                    W+GNGQ   GLIEGIAD+VRLKA YA  +W QPG G  W+QGYDVTARFLD
Sbjct: 105 ---------WDGNGQALSGLIEGIADYVRLKAGYAADYWGQPGHGGDWNQGYDVTARFLD 155

Query: 179 YCNDLRNGFVAELNKKM 195
           YCN ++NGFVA+LN  M
Sbjct: 156 YCNGIKNGFVADLNSMM 172


>Glyma16g33960.1 
          Length = 156

 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 85/182 (46%), Gaps = 33/182 (18%)

Query: 47  DYAKKTLSAATDFIWRVFQQVNAEDRKDVQQVSLFIDDMDG--VAYASNNEIHVSANYIG 104
           +YAK TL +AT FIWR+FQQ N  DRK+VQ+VSLF+DDM G       N +  +   +  
Sbjct: 2   EYAKPTLDSATQFIWRIFQQSNPSDRKNVQKVSLFVDDMHGNNKRGRENRDNKLEWGWSC 61

Query: 105 NYSGDLVREFSGVIYHEMTHIWQWNGNGQTPVGLIEGIADFVRLKANYAPSHWVQPGQGD 164
           +   ++   FS   +  M H              I  I+ F   +      H        
Sbjct: 62  SCWINIKTYFSSTKHPLMYH--------------IILISQFRAFEGESGHGHGRLTLDAA 107

Query: 165 KWDQGYDVTARF--LDYCNDLRNGFVAELNKKMRTGYSNQYFVDLLGKSVDQLWSDYKAK 222
           +W    D+  +F  + +C              MR GYS+Q FV LLGK+V QLW DYKAK
Sbjct: 108 RW-ASRDMCVKFPCVIHC--------------MRDGYSDQLFVQLLGKAVYQLWQDYKAK 152

Query: 223 YA 224
           Y 
Sbjct: 153 YG 154


>Glyma20g26590.1 
          Length = 54

 Score = 74.7 bits (182), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/41 (78%), Positives = 38/41 (92%)

Query: 176 FLDYCNDLRNGFVAELNKKMRTGYSNQYFVDLLGKSVDQLW 216
           FLDYC+ L+NGFVA+LNK+MRTGYS+Q FV LLGK+VDQLW
Sbjct: 2   FLDYCDGLKNGFVAQLNKQMRTGYSDQLFVQLLGKTVDQLW 42


>Glyma18g12760.1 
          Length = 257

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/216 (23%), Positives = 84/216 (38%), Gaps = 37/216 (17%)

Query: 15  ATIQGNHAVDYTVTNTATSTAGGARFTTD-IGEDYAKKTLSAATDFIWR-VFQQVNAED- 71
           A  + +     TV N A  +  G RF    +  D A + L   + ++   ++   N  D 
Sbjct: 35  ANYEASKTFHITVVNDAKDSPAGRRFALSYVSNDEASRILLNTSSYVEHFLYPNSNNNDS 94

Query: 72  ---RKDVQQVSL-------FIDDMDGVAYASNNEIHVSA----NYIGNYSGDLVRE---- 113
              +K +  V+L        + D+  V  A+ N +        +Y+   S  L+ +    
Sbjct: 95  NYPKKHIDSVTLQLPRRNLNVTDIVAVYTAAGNHLQRGGGKCFSYVIEISPTLLEDQRYD 154

Query: 114 ---FSGVIYHEMTHIWQWNGNGQTPVGLIEGIADFVRLKANY--------APSHWVQPGQ 162
                G I   M  +W W G    P GL++G+A++V   A +              + G 
Sbjct: 155 KIAIVGAILRGMAKVWIWEG---APQGLVDGMAEYVAEMAGFRRGMVSGGGEMPQCREGG 211

Query: 163 GDKW--DQGYDVTARFLDYCNDLRNGFVAELNKKMR 196
           G  W  D+     AR L YC   + GF+  LN+ MR
Sbjct: 212 GGWWWEDKDPSHVARLLHYCEKFKKGFIQRLNEAMR 247