Jatropha Genome Database

JcCA0153811.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153811.20 + phase: 0 /partial
         (245 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g50140.1                                                       308   5e-84
Glyma08g26890.1                                                       260   8e-70

>Glyma18g50140.1 
          Length = 613

 Score =  308 bits (788), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 167/249 (67%), Positives = 189/249 (75%), Gaps = 11/249 (4%)

Query: 1   MTEESGTRVSSDNPT-ANTDASQSRQRKRRKWDQPAESLVSAGLS--GVVPLGNIGTLAG 57
           MTE+S  RVSS N T A  +ASQ+RQRK+RKWDQPAESL+  G++  G +PL N  TL G
Sbjct: 1   MTEDSIVRVSSSNETSAANEASQTRQRKKRKWDQPAESLMPVGMTVPGALPLSNAVTLGG 60

Query: 58  ISLPGLASV-SGAYLTNQLVASCATVPPVFQVPSAPLNNGVVVSRPNQPKIQDELIIARE 116
           ++ P +A V SG  LTN L AS        Q+P       V   + NQ KIQDELIIARE
Sbjct: 61  VAFPAMAPVISGTLLTNPLAASA-------QLPQHAAAAAVAAQKLNQHKIQDELIIARE 113

Query: 117 IVINDAESSVRYKLTKRQTQEEIQKCTGAVVITRGKYRPLNTPPDGEKPLYLHISSGAHL 176
           IVINDAESSVRYKLTKRQTQEEIQ+CTGA+VITRGKYR  N P DGEKPLYLHIS+GAH+
Sbjct: 114 IVINDAESSVRYKLTKRQTQEEIQRCTGAIVITRGKYRLPNAPHDGEKPLYLHISAGAHI 173

Query: 177 KDTAERILAVDRAAAMIEEMLKQSPNLQSAPSIFPIAGGSGLKALSTCVFLGFDADSSLN 236
           K+TAERILAVDRAAAMIEE+LKQ  N QS  S+ P A  +G+K LSTCVFLGFDAD SLN
Sbjct: 174 KETAERILAVDRAAAMIEEILKQVQNSQSISSVTPSALVNGVKMLSTCVFLGFDADPSLN 233

Query: 237 IAARIRGPN 245
           I ARIRGPN
Sbjct: 234 IVARIRGPN 242


>Glyma08g26890.1 
          Length = 636

 Score =  260 bits (665), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 145/233 (62%), Positives = 162/233 (69%), Gaps = 32/233 (13%)

Query: 15  TANTDASQSRQRKRRKWDQPAESLVSAGLS--GVVPLGNIGTLAGISLPGLASVSGAYLT 72
           +A  DASQ+RQRK+RKWDQPAESL+  G++  G +PL N  +L G+              
Sbjct: 16  SAANDASQTRQRKKRKWDQPAESLMPVGMAVPGALPLSNAVSLGGL-------------- 61

Query: 73  NQLVASCATVPPVFQVPSAPLNNGVVVSRPNQPKIQDELIIAREIVINDAESSVRYKLTK 132
                           P   +   V   + NQ KIQDELIIAREIVINDAESSVRYKLTK
Sbjct: 62  ----------------PQHTVAAAVAAQKLNQQKIQDELIIAREIVINDAESSVRYKLTK 105

Query: 133 RQTQEEIQKCTGAVVITRGKYRPLNTPPDGEKPLYLHISSGAHLKDTAERILAVDRAAAM 192
           RQTQEEIQ+CTGA+VITRGKYR  N P DG KPLYLHIS+GAH+K+TAERILAVDRAAAM
Sbjct: 106 RQTQEEIQRCTGAIVITRGKYRLPNAPHDGGKPLYLHISAGAHIKETAERILAVDRAAAM 165

Query: 193 IEEMLKQSPNLQSAPSIFPIAGGSGLKALSTCVFLGFDADSSLNIAARIRGPN 245
           IEEMLKQ  N QS  S  P A  + LK LSTCVFLGFDAD SLNI ARIRGPN
Sbjct: 166 IEEMLKQEQNSQSISSASPSALVNILKMLSTCVFLGFDADPSLNIVARIRGPN 218