Jatropha Genome Database

JcCA0153671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153671.10 + phase: 2 /partial
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g25530.1                                                       164   3e-41
Glyma20g05620.1                                                       160   3e-40
Glyma01g05750.1                                                       135   2e-32
Glyma02g11980.1                                                       132   1e-31

>Glyma02g25530.1 
          Length = 358

 Score =  164 bits (415), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 83/147 (56%), Positives = 104/147 (70%), Gaps = 1/147 (0%)

Query: 1   TTLSELESAGQHYCEGDWNNLKNQHLGMDDLDLLRYCFSSAYMVALLHDSLGIPMDDKRI 60
           T+L +LE+ G+HYCE  W+ LK+ H  +D +DLL+YCFSSAYM+ALLHD LGI M++KR+
Sbjct: 201 TSLFQLEAEGRHYCEDHWDALKDLHNEVDYMDLLKYCFSSAYMLALLHDVLGIAMEEKRV 260

Query: 61  GFANHT-SSHLDWTLGAFILESTLEPLDTEIDNLDQIVGNEWVTYFSXXXXXXXXXXXXX 119
           GF N   +S +DWTLG+FI E+  EPL+ E  +   IVGNE VTYFS             
Sbjct: 261 GFGNRKINSDVDWTLGSFITETMAEPLELEHLDTGMIVGNESVTYFSLFAFLFLFMLAAF 320

Query: 120 XXXQWRKPQLKTIYDLEKGHYIVTRVP 146
              QWRKPQLKT+YDLEKG YIVTR+P
Sbjct: 321 FVLQWRKPQLKTVYDLEKGRYIVTRIP 347


>Glyma20g05620.1 
          Length = 159

 Score =  160 bits (406), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 81/137 (59%), Positives = 99/137 (72%), Gaps = 1/137 (0%)

Query: 11  QHYCEGDWNNLKNQHLGMDDLDLLRYCFSSAYMVALLHDSLGIPMDDKRIGFANHT-SSH 69
           QHYCE  W+ LKNQH  +D LDLL+YCFSSAYM+ALLHD LGI M++KR+GF +   +SH
Sbjct: 22  QHYCEDHWDALKNQHNEVDYLDLLKYCFSSAYMLALLHDVLGIAMEEKRVGFGDQKINSH 81

Query: 70  LDWTLGAFILESTLEPLDTEIDNLDQIVGNEWVTYFSXXXXXXXXXXXXXXXXQWRKPQL 129
           +DWTLG+FI+E+  EPL+ E  +   IVGNE +TYFS                QWRKPQL
Sbjct: 82  VDWTLGSFIIETMAEPLELEHIDTGMIVGNESLTYFSLFAFLFLFILAAFFVMQWRKPQL 141

Query: 130 KTIYDLEKGHYIVTRVP 146
           KT+YDLEKG YIVTR+P
Sbjct: 142 KTVYDLEKGRYIVTRLP 158


>Glyma01g05750.1 
          Length = 539

 Score =  135 bits (339), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 74/152 (48%), Positives = 93/152 (61%), Gaps = 18/152 (11%)

Query: 3   LSELESAGQHYCEGDWNNLKNQHLGMDDLDLLRYCFSSAYMVALLHDSLGIPMDDKRIGF 62
           LS+L +AG+ +C  DW  LK +++  D+ DLLRYCFSSAY+VALLHDSLGI +DD+R+  
Sbjct: 395 LSKLMNAGKEFCGKDWLRLKKKYVSHDEEDLLRYCFSSAYIVALLHDSLGIALDDERVKV 454

Query: 63  ANHTSS-HLDWTLGAFILESTLEPLDTEIDNLDQIVGNEWV-TYFSXXXXXXXX------ 114
           AN   S  LDW LGAFIL++     D +I N      + W+ T FS              
Sbjct: 455 ANQVGSIPLDWALGAFILQTA---ADADIKN------HNWIATIFSDESHTLLSIIGIFI 505

Query: 115 -XXXXXXXXQWRKPQLKTIYDLEKGHYIVTRV 145
                    +WRKPQLKTIYDLEKG YI+TRV
Sbjct: 506 VLLTAWSISRWRKPQLKTIYDLEKGRYIITRV 537


>Glyma02g11980.1 
          Length = 537

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 75/147 (51%), Positives = 92/147 (62%), Gaps = 8/147 (5%)

Query: 3   LSELESAGQHYCEGDWNNLKNQHLGMDDLDLLRYCFSSAYMVALLHDSLGIPMDDKRIGF 62
           LS+L S GQ +C  DW  LK +++  D+ DLLRYCFSSAY+VALLHDSLGI +DD+R+  
Sbjct: 393 LSKLMSVGQEFCGEDWLRLKKKYVSHDEDDLLRYCFSSAYIVALLHDSLGIALDDERVKV 452

Query: 63  ANHTSS-HLDWTLGAFILESTLEPLDTEIDN---LDQIVGNEWVTYFSXXXXXXXXXXXX 118
           AN   S  LDW LGAFIL++     D +I N   +  I  +E  T  S            
Sbjct: 453 ANQVGSIPLDWALGAFILQTA---ADADIPNHNWIGTIFSDESHTLLS-IIGIFIILLTA 508

Query: 119 XXXXQWRKPQLKTIYDLEKGHYIVTRV 145
               +WRKPQLKTIYDLEKG YI+TRV
Sbjct: 509 WSISRWRKPQLKTIYDLEKGRYIITRV 535