Jatropha Genome Database

JcCA0153601.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153601.20 + phase: 0 
         (240 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g25960.1                                                       390   e-109
Glyma10g41290.1                                                       389   e-108

>Glyma20g25960.1 
          Length = 872

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 180/216 (83%), Positives = 201/216 (93%)

Query: 12  NIMLAIYEKKTTSVDLYRPLRNYIAMFYSEREAQNLEDDLQTLKQYRTDVERQSDPSPTS 71
           NIMLAI+EKKT SVDLYRPLRNY+A  YSEREAQNLEDDLQTLKQ R+DVER SDPS  +
Sbjct: 12  NIMLAIFEKKTNSVDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRSDVERHSDPSLPT 71

Query: 72  RRDLLQNYYKALCLVETRFPISPDKDHINSVTFVWYDAFKQKQKASQQNIHLEKAAILFN 131
           RRDLLQ YYK+LCLVETRFPIS D DH+N++TFVW+DAFK KQKASQQNIHLEKA++LFN
Sbjct: 72  RRDLLQTYYKSLCLVETRFPISSDPDHVNALTFVWFDAFKPKQKASQQNIHLEKASVLFN 131

Query: 132 LGAVYSQIGLSFDRTTVEGRRQAIHSFIAAAGAFAYLRDNAATKASMGSSTTVDVSVECV 191
           LGAVYSQIGLS+DR TV+GRRQA H+FIAAAG+FA+LRDNA+ KAS+GSSTTVD+SVEC 
Sbjct: 132 LGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASMKASVGSSTTVDLSVECA 191

Query: 192 GMLERLMLAQAQECVFENTIAKGSTPGVCAKIARQV 227
           GMLE+LMLAQAQECVFENTIAKGSTPGVCAKI+RQV
Sbjct: 192 GMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQV 227


>Glyma10g41290.1 
          Length = 872

 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 180/216 (83%), Positives = 201/216 (93%)

Query: 12  NIMLAIYEKKTTSVDLYRPLRNYIAMFYSEREAQNLEDDLQTLKQYRTDVERQSDPSPTS 71
           NIMLAI EKKT SVDLYRPLRNY+A  YSEREAQNLEDDLQTLKQ R+DVER SDPS  +
Sbjct: 11  NIMLAISEKKTNSVDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRSDVERHSDPSLPA 70

Query: 72  RRDLLQNYYKALCLVETRFPISPDKDHINSVTFVWYDAFKQKQKASQQNIHLEKAAILFN 131
           RRDLLQ+YYK+LCLVETRFPIS D DH+N++TFVW+DAFK KQKASQQNIHLEKA++LFN
Sbjct: 71  RRDLLQSYYKSLCLVETRFPISSDPDHVNALTFVWFDAFKPKQKASQQNIHLEKASVLFN 130

Query: 132 LGAVYSQIGLSFDRTTVEGRRQAIHSFIAAAGAFAYLRDNAATKASMGSSTTVDVSVECV 191
           LGAVYSQIGLS+DR TV+GRRQA H+FIAAAG+FA+LRDNA+ KAS+GSSTTVD+SVEC 
Sbjct: 131 LGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASLKASVGSSTTVDLSVECA 190

Query: 192 GMLERLMLAQAQECVFENTIAKGSTPGVCAKIARQV 227
           GMLE+LMLAQAQECVFENTIAKGSTPGVCAKI+RQV
Sbjct: 191 GMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQV 226