Jatropha Genome Database
- JcCA0153521.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0153521.20 + phase: 0
(226 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma11g37440.2 341 4e-94
Glyma11g37440.1 341 4e-94
Glyma18g01410.1 117 1e-26
>Glyma11g37440.2
Length = 239
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 190/220 (86%), Gaps = 10/220 (4%)
Query: 1 MEVGLSLNALVRLPLSNSSRTHED---VLVKHSLFTSR------TGQKSQHRKTLLVVNA 51
MEVG+SLNALVRLPLSNS R H+D ++++HSLF+SR K R + VV A
Sbjct: 1 MEVGMSLNALVRLPLSNS-RFHDDAAPMIIRHSLFSSRKQQQQQQSYKVPQRHQVFVVEA 59
Query: 52 KGKRGMQARQFQRPPAPSLPKIEDDGNPKFLIFIRMANVYLWYPLSLVTGGTTAKITVAA 111
KGK+GM +RQFQR P LPKIEDDGNPKF+IFIRMANVYLWYPLS+V+GGTTAKI VAA
Sbjct: 60 KGKKGMMSRQFQRNAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSIVSGGTTAKIMVAA 119
Query: 112 KDNFLGKYIYKDTLARNLAAVIYRDEKEIQKTAFKQYRVLRSATEFRYGYKLVENGNMRA 171
KDNFLGKYIYKDTL RNLAAVIYRDEKE+QK+AFKQYRVLR+AT+FRYGYKLVENGN+RA
Sbjct: 120 KDNFLGKYIYKDTLDRNLAAVIYRDEKEVQKSAFKQYRVLRTATDFRYGYKLVENGNIRA 179
Query: 172 ALSTSDVIELPTEDQLKTVFDKVKDFFGGAKESFGKLTAL 211
ALST+DVIELPT+D+LKTV DKVKDFFG AKESFGK+T+L
Sbjct: 180 ALSTTDVIELPTQDKLKTVLDKVKDFFGDAKESFGKITSL 219
>Glyma11g37440.1
Length = 239
Score = 341 bits (874), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 167/220 (75%), Positives = 190/220 (86%), Gaps = 10/220 (4%)
Query: 1 MEVGLSLNALVRLPLSNSSRTHED---VLVKHSLFTSR------TGQKSQHRKTLLVVNA 51
MEVG+SLNALVRLPLSNS R H+D ++++HSLF+SR K R + VV A
Sbjct: 1 MEVGMSLNALVRLPLSNS-RFHDDAAPMIIRHSLFSSRKQQQQQQSYKVPQRHQVFVVEA 59
Query: 52 KGKRGMQARQFQRPPAPSLPKIEDDGNPKFLIFIRMANVYLWYPLSLVTGGTTAKITVAA 111
KGK+GM +RQFQR P LPKIEDDGNPKF+IFIRMANVYLWYPLS+V+GGTTAKI VAA
Sbjct: 60 KGKKGMMSRQFQRNAPPPLPKIEDDGNPKFVIFIRMANVYLWYPLSIVSGGTTAKIMVAA 119
Query: 112 KDNFLGKYIYKDTLARNLAAVIYRDEKEIQKTAFKQYRVLRSATEFRYGYKLVENGNMRA 171
KDNFLGKYIYKDTL RNLAAVIYRDEKE+QK+AFKQYRVLR+AT+FRYGYKLVENGN+RA
Sbjct: 120 KDNFLGKYIYKDTLDRNLAAVIYRDEKEVQKSAFKQYRVLRTATDFRYGYKLVENGNIRA 179
Query: 172 ALSTSDVIELPTEDQLKTVFDKVKDFFGGAKESFGKLTAL 211
ALST+DVIELPT+D+LKTV DKVKDFFG AKESFGK+T+L
Sbjct: 180 ALSTTDVIELPTQDKLKTVLDKVKDFFGDAKESFGKITSL 219
>Glyma18g01410.1
Length = 117
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 83/153 (54%), Gaps = 49/153 (32%)
Query: 15 LSNSSRTHEDV-LVKHSLFTSRTGQ--KSQHRKTLLVVNAKGKRGMQARQFQRPPAPSLP 71
LS H+D +V+HSLF+ R Q K ++ + VV AKGK+GM +RQFQR P LP
Sbjct: 7 LSRIHSVHDDAPMVRHSLFSIRKQQSYKVLPQRQVFVVEAKGKKGMMSRQFQRNSPPPLP 66
Query: 72 KIEDDGNPKFLIFIRMANVYLWYPLSLVTGGTTAKITVAAKDNFLGKYIYKDTLARNLAA 131
KIEDDGNPKF+IFIRMAN
Sbjct: 67 KIEDDGNPKFVIFIRMAN------------------------------------------ 84
Query: 132 VIYRDEKEIQKTAFKQYRVLRSATEFRYGYKLV 164
DEKE+QK+A KQYRVLRSAT+FRYGYKL+
Sbjct: 85 ----DEKEVQKSACKQYRVLRSATDFRYGYKLL 113