Jatropha Genome Database

JcCA0153501.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0153501.20 + phase: 0 /pseudo/partial
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g02560.1                                                       202   2e-52
Glyma07g38160.1                                                       196   1e-50
Glyma20g37370.1                                                       196   1e-50
Glyma10g30020.1                                                       196   1e-50
Glyma03g40290.1                                                       188   3e-48
Glyma19g42900.1                                                       184   5e-47
Glyma03g03880.1                                                        97   1e-20
Glyma06g22020.1                                                        94   8e-20
Glyma01g31960.1                                                        64   1e-10

>Glyma17g02560.1 
          Length = 516

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/138 (73%), Positives = 114/138 (82%)

Query: 18  SDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHL 77
           SD   V S+ LFV L+CACIIIGHLLE+NRW+NESITAL IGLCTGV IL TT GKSSH+
Sbjct: 11  SDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIGLCTGVFILFTTGGKSSHI 70

Query: 78  FLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFK 137
            +F E LFFIY+LPPIIFNAGFQVKKKQFFRNFMTI+LFGAVGTLISF IIS+G+   F+
Sbjct: 71  LVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQ 130

Query: 138 KLNIDFLDTVDYLGTLAL 155
           KL+I  L   D+LG L L
Sbjct: 131 KLDIGSLKIGDFLGVLKL 148


>Glyma07g38160.1 
          Length = 516

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 104/162 (64%), Positives = 121/162 (74%), Gaps = 7/162 (4%)

Query: 18  SDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAI-------GLCTGVIILLTT 70
           SD   V S+ LFV L+CACIIIGHLLE+NRW+NESITAL I       GLCTGV IL TT
Sbjct: 4   SDHASVVSMNLFVALLCACIIIGHLLEENRWINESITALLIATFFLCQGLCTGVFILFTT 63

Query: 71  QGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISV 130
            GKSSH+ +F E LFFIY+LPPIIFNAGFQVKKKQFFRNFMTI+LFGAVGTLISF IIS+
Sbjct: 64  GGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISL 123

Query: 131 GSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           G+   F+KL+ID L   D+L   A+    + VC+L  +   E
Sbjct: 124 GAIHFFQKLDIDSLKIGDFLAIGAIFSATDSVCTLQVLNQDE 165


>Glyma20g37370.1 
          Length = 546

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 98/172 (56%), Positives = 130/172 (75%)

Query: 1   MGFNLGSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGL 60
           M F + ++V +L   S SD   V S+ LFV L+C CI++GHLLE+NRWMNESITAL IG+
Sbjct: 1   MVFEISTVVSKLQTLSTSDHASVVSMNLFVALLCGCIVLGHLLEENRWMNESITALLIGV 60

Query: 61  CTGVIILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVG 120
           CTG++ILL + GKSSH+ +F E LFFIY+LPPIIFNAGFQVKKKQFF NFMTI+LFGA+G
Sbjct: 61  CTGIVILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIG 120

Query: 121 TLISFIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           TLIS  II++G+ ++FK+L++  L+  D+L   A+    + VC+L  +   E
Sbjct: 121 TLISCTIITLGATQIFKRLDVGPLELGDFLAIGAIFAATDSVCTLQVLNQDE 172


>Glyma10g30020.1 
          Length = 544

 Score =  196 bits (498), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 99/168 (58%), Positives = 128/168 (76%)

Query: 5   LGSLVVRLGLKSGSDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGV 64
           L S+V +L   S SD   V S+ LFV L+C CI++GHLLE+NRWMNESITAL IG+CTGV
Sbjct: 3   LSSVVSKLQTLSTSDHASVVSMNLFVALLCGCIVLGHLLEENRWMNESITALLIGVCTGV 62

Query: 65  IILLTTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLIS 124
           +ILL + GKSSH+ +F E LFFIY+LPPIIFNAGFQVKKKQFF NFMTI+LFGA+GTLIS
Sbjct: 63  VILLFSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIMLFGAIGTLIS 122

Query: 125 FIIISVGSAKLFKKLNIDFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
             II++G+ ++FK+L++  L+  D+L   A+    + VC+L  +   E
Sbjct: 123 CTIITLGATQIFKRLDVGPLELGDFLAIGAIFAATDSVCTLQVLNQDE 170


>Glyma03g40290.1 
          Length = 530

 Score =  188 bits (477), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 96/156 (61%), Positives = 119/156 (76%), Gaps = 1/156 (0%)

Query: 18  SDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHL 77
           SD   V S+ +FV L+CACI+IGHLLE+NRW+NESITAL IG+CTGV+ILL ++GKSSHL
Sbjct: 6   SDHASVVSMNIFVALLCACIVIGHLLEENRWLNESITALLIGICTGVVILLLSRGKSSHL 65

Query: 78  FLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFK 137
            +F E LFFIY+LPPIIFNAGFQVKKKQFF NF+TI LFGAVGTLIS  II+ G  ++FK
Sbjct: 66  LVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITITLFGAVGTLISCSIITFGVTQIFK 125

Query: 138 KLNI-DFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           ++ +   LD  DYL   A+    + VC+L  +   E
Sbjct: 126 RMGVGKSLDMGDYLAIGAIFAATDSVCTLQVLNQDE 161


>Glyma19g42900.1 
          Length = 528

 Score =  184 bits (467), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 94/156 (60%), Positives = 117/156 (75%), Gaps = 1/156 (0%)

Query: 18  SDEVHVDSITLFVTLICACIIIGHLLEKNRWMNESITALAIGLCTGVIILLTTQGKSSHL 77
           SD   V S+ +FV L+CACI+IGHLLE+NRW+NESITAL IG+CTG++ILL ++GKSSHL
Sbjct: 4   SDHASVVSMNIFVALLCACIVIGHLLEENRWVNESITALLIGICTGIVILLLSRGKSSHL 63

Query: 78  FLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFK 137
            +F E LFFIY+LPPIIFNAGFQVKKKQFF NF+TI LFG VGTLIS  II+ G  ++FK
Sbjct: 64  LVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITITLFGVVGTLISCSIITFGVTQIFK 123

Query: 138 KLNI-DFLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
           ++     LD  DYL   A+    + VC+L  +   E
Sbjct: 124 RMGFGKSLDMGDYLAIGAIFAATDSVCTLQVLNQDE 159


>Glyma03g03880.1 
          Length = 172

 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 83  HLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFKKLNID 142
           +LFFIY+LPPIIFN GFQVKKKQFFRNFM I+LFGAVGTLISF IIS+ +   F+KL+I 
Sbjct: 27  NLFFIYLLPPIIFNVGFQVKKKQFFRNFMAIMLFGAVGTLISFCIISLDAIHFFQKLDIG 86

Query: 143 FLDTVDYLG 151
            L   D+LG
Sbjct: 87  SLKIGDFLG 95


>Glyma06g22020.1 
          Length = 202

 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 52/90 (57%), Positives = 64/90 (71%)

Query: 83  HLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAVGTLISFIIISVGSAKLFKKLNID 142
           +LFFIY+LPPIIFN GFQVKKKQFF NFM I+LFGAVGTLISF IIS+ +   F+KL+I 
Sbjct: 27  NLFFIYLLPPIIFNVGFQVKKKQFFHNFMAIMLFGAVGTLISFCIISLVAIHFFQKLDIG 86

Query: 143 FLDTVDYLGTLAL*FL*NYVCSLTYVYTRE 172
            L   D+L   A+    + VC+L  +   E
Sbjct: 87  SLKIGDFLAIGAIFSATDSVCTLQVLNQDE 116


>Glyma01g31960.1 
          Length = 117

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 1/51 (1%)

Query: 69  TTQGKSSHLFLFDEHLFFIYVLPPIIFNAGFQVKKKQFFRNFMTIVLFGAV 119
           +T+GK+SH+ +F E LFFIY+LPPIIFN+G  VKKKQF   +MTI+ F  V
Sbjct: 29  STRGKNSHILVFIEDLFFIYLLPPIIFNSGL-VKKKQFSCTYMTIIFFAVV 78