Jatropha Genome Database

JcCA0152411.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152411.20 + phase: 0 
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g01750.1                                                       345   1e-95
Glyma10g01750.2                                                       240   7e-64
Glyma02g01690.1                                                       100   2e-21
Glyma08g26100.1                                                        78   7e-15
Glyma12g00370.1                                                        75   5e-14

>Glyma10g01750.1 
          Length = 208

 Score =  345 bits (886), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 168/209 (80%), Positives = 180/209 (86%), Gaps = 1/209 (0%)

Query: 1   MGWLTRFLAAVAFLAIGVIFSPETFGSKSVSQLSTYLKLAHLLSFSTAFGAALWVTFIGG 60
           MGWL+RF+ AVAFLAIGVIFSPET GSKS + LSTYLKLAHLL FSTAFGAALWVTFIGG
Sbjct: 1   MGWLSRFITAVAFLAIGVIFSPETLGSKSTT-LSTYLKLAHLLCFSTAFGAALWVTFIGG 59

Query: 61  IIMFKNLPRHQFGNLQSKMFPAYFWLVGVCCATSVGSFGYLHPWKSASTAEKYQLGXXXX 120
           IIMFKNLPRHQFGNLQSKMFPAYF +VGVCCA SV SFGYLHPWK++ST E+YQLG    
Sbjct: 60  IIMFKNLPRHQFGNLQSKMFPAYFSMVGVCCAVSVASFGYLHPWKTSSTTERYQLGFLLS 119

Query: 121 XXXXXXXXXXVFTPMTIEMMRQRHKVEREENIGTEVGWSKNQEAAKTNPKLAAMNKKFGM 180
                     VFTPMTIEMM+QRHKVERE NIG EVGWSKN E AK+NPKLAAMNKKFGM
Sbjct: 120 SFAFNLTNLFVFTPMTIEMMKQRHKVERENNIGEEVGWSKNVEVAKSNPKLAAMNKKFGM 179

Query: 181 IHGFSSLANIMSFGGLAMHSWYLAGKLNL 209
           IHG SSLANIMSFG LA+HSWYLAGK++L
Sbjct: 180 IHGLSSLANIMSFGSLAIHSWYLAGKIDL 208


>Glyma10g01750.2 
          Length = 149

 Score =  240 bits (613), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 112/146 (76%), Positives = 122/146 (83%)

Query: 64  FKNLPRHQFGNLQSKMFPAYFWLVGVCCATSVGSFGYLHPWKSASTAEKYQLGXXXXXXX 123
           F+NLPRHQFGNLQSKMFPAYF +VGVCCA SV SFGYLHPWK++ST E+YQLG       
Sbjct: 4   FRNLPRHQFGNLQSKMFPAYFSMVGVCCAVSVASFGYLHPWKTSSTTERYQLGFLLSSFA 63

Query: 124 XXXXXXXVFTPMTIEMMRQRHKVEREENIGTEVGWSKNQEAAKTNPKLAAMNKKFGMIHG 183
                  VFTPMTIEMM+QRHKVERE NIG EVGWSKN E AK+NPKLAAMNKKFGMIHG
Sbjct: 64  FNLTNLFVFTPMTIEMMKQRHKVERENNIGEEVGWSKNVEVAKSNPKLAAMNKKFGMIHG 123

Query: 184 FSSLANIMSFGGLAMHSWYLAGKLNL 209
            SSLANIMSFG LA+HSWYLAGK++L
Sbjct: 124 LSSLANIMSFGSLAIHSWYLAGKIDL 149


>Glyma02g01690.1 
          Length = 107

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 54/74 (72%), Gaps = 11/74 (14%)

Query: 136 TIEMMRQRHKVEREENIGTEVGWSKNQEAAKTNPKLAAMNKKFGMIHGFSSLANIMSFGG 195
           T  MM QRHKVERE NIG E           +NPKLAAMNKK GMI G SSLANIMSFG 
Sbjct: 45  TKPMMNQRHKVERENNIGEE-----------SNPKLAAMNKKLGMIQGLSSLANIMSFGS 93

Query: 196 LAMHSWYLAGKLNL 209
           LA+HSWYLAGK++L
Sbjct: 94  LAIHSWYLAGKIDL 107


>Glyma08g26100.1 
          Length = 383

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 12/189 (6%)

Query: 29  SVSQLSTYLKLAHLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFWLVG 88
           S+  L++ + +A+LL F+TA+G  +WVTFI   +  + +PR QF  +QSK++P YF  + 
Sbjct: 195 SMESLNSLMGVANLLGFATAYGICVWVTFISSYVQSRTMPRQQFAVVQSKIYPVYFRAMA 254

Query: 89  VCCATSVGSFGYLHPWKSASTAEKYQLGXXXXXXXXXXXXXXVFTPMTIEMMRQRHKVER 148
              A +  +    H   ++   + Y L                  P   ++M +R K+E+
Sbjct: 255 YSIALAFLAHFLAHRNTNSDMLQSYNL---LASLATLFLNYLYLEPRATKLMLERIKIEK 311

Query: 149 EENIGTEVGWSKNQEAAKTNP---------KLAAMNKKFGMIHGFSSLANIMSFGGLAMH 199
           EE  G       ++      P         ++  +N K    + +SS  NI++   L  H
Sbjct: 312 EEGRGRSQDMMSSRTVDPKEPADQEDALRSRIIKLNDKLKKFNSYSSFLNILNLMSLTWH 371

Query: 200 SWYLAGKLN 208
             YLA +L+
Sbjct: 372 LVYLAQRLH 380


>Glyma12g00370.1 
          Length = 341

 Score = 75.1 bits (183), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 13/193 (6%)

Query: 26  GSKSVSQLSTYLKLAHLLSFSTAFGAALWVTFIGGIIMFKNLPRHQFGNLQSKMFPAYFW 85
           GS     L++ + +A++L FSTA+G  +WVTFI   +  + + R QF  +QSK++P YF 
Sbjct: 147 GSLERQSLNSLMGVANMLGFSTAYGMCVWVTFISSYVQSRAMARQQFAVVQSKIYPVYFR 206

Query: 86  LVGVCCATSVGSFGYLHPWKSASTAEKYQLGXXXXXXXXXXX---XXXVFTPMTIEMMRQ 142
              +  +  V  F ++   ++   + K  L                     P   ++M +
Sbjct: 207 --AMSYSIGVALFAHVLAHRNTLLSNKSDLLQAYNLLASLVTLFFNSLYLEPRATKLMFE 264

Query: 143 RHKVEREENIG-TEVGWSKNQEAAKT-------NPKLAAMNKKFGMIHGFSSLANIMSFG 194
           R K+E+EE  G +E   S+ +E A T         ++  +N K   ++ +SS  NI++  
Sbjct: 265 RIKIEKEEGRGRSEDVSSRTKEPASTTADQDAVRTRIIKLNDKLKKLNSYSSFLNILNLM 324

Query: 195 GLAMHSWYLAGKL 207
            L  H  YLA +L
Sbjct: 325 SLTWHLVYLAQRL 337