Jatropha Genome Database

JcCA0152411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152411.10 - phase: 0 /partial
         (958 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g01740.1                                                       389   e-108
Glyma02g01680.1                                                       276   8e-74
Glyma19g05660.1                                                        80   1e-14
Glyma16g00740.1                                                        60   2e-08

>Glyma10g01740.1 
          Length = 1285

 Score =  389 bits (1000), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 306/808 (37%), Positives = 400/808 (49%), Gaps = 130/808 (16%)

Query: 2   LDSNSPSKTFLGVRFVLFGFDSIHERQVRAKLLNGGGVDAGQYSQSCSHLIVDKIVYDDP 61
           +++  PS  F GVRFVL GF+ + + Q+R KL NGGGVD GQY  SC+H+IVD + YDDP
Sbjct: 1   MEATYPSPMFRGVRFVLRGFNPVAQNQIRFKLANGGGVDVGQYGGSCTHVIVDNVAYDDP 60

Query: 62  LCVAARNDGKTLVTALWVDHSCDIGMAVDATSIMYRPPRDLNGIPGAKHLIMCLTGYQRQ 121
           +CVAARND KT+VTALWV+HS DIGM VDATS+MYRP +DL+GIPGAK LIMCLTGY RQ
Sbjct: 61  VCVAARNDRKTVVTALWVEHSADIGMPVDATSVMYRPLKDLDGIPGAKDLIMCLTGYLRQ 120

Query: 122 DRDDIMTMVSLMGAQFSKPLVANKVTHLICYKFEG------------------------- 156
           DRDDIMTMV LMGAQFSKPLVANKVTHLICYKFEG                         
Sbjct: 121 DRDDIMTMVGLMGAQFSKPLVANKVTHLICYKFEGLFRFLKFWHHIQLHVYAILFLLIAF 180

Query: 157 ----------------EKYELASKLKKIKLVNHRWLEDCLRDWELLPEDNYNKSGYEMEM 200
                           EKYELA KL  IKLVNHRWLEDCL++W LLPED YNKSG+E+EM
Sbjct: 181 YYRLFMFMMYFILFVHEKYELAKKLGTIKLVNHRWLEDCLKEWVLLPEDKYNKSGFELEM 240

Query: 201 MEAEAKDSEEDVEDITVKQSSHQITYKSP-HLKISTPKPCQLPKSTGELPKMPQILSEPE 259
           ME EAKDSE++ ED  + QS  +   +SP   KI       L KS  E        + P+
Sbjct: 241 MEEEAKDSEQEAEDSKLGQSGGRKRKQSPLSSKIGIAATPGLSKSATEASNALPDSTGPQ 300

Query: 260 GLPSAVNKDMLLT-PGRKHRIDTAVGIDNTCVSEV------------------LACQ-VS 299
            LP+  N +  LT PG K R D      N   S++                    CQ + 
Sbjct: 301 VLPNVNNGENSLTVPGNKSRPDQGSSFHNVDDSKLPNKYVKTSESKNADSPKAPGCQDLG 360

Query: 300 GASNDAISVGLPDLQDRTPKSTKGCSDL-ESIPRSANKSNSDARFIAVSYVRKTPRKXXX 358
              N   S   PDL     +S K  SDL E+   +A  ++S+ +    SY RK  +    
Sbjct: 361 NMGNTNSSDQQPDLNGDISESKKVASDLRETSASAAGVAHSNEKLRTASYSRKNQKGFTL 420

Query: 359 XXXXXXXXG-ELDTKGSPKVQ-FSESILSGEL-----GN--VKGSP-KLQFGESINMPSS 408
                   G E +   + KVQ  SE + S  +     GN  VK  P  L   + IN    
Sbjct: 421 PRILDESSGREGNNCDNSKVQKASEGVKSTSVEVSGKGNDFVKDEPISLLPQKRIN---- 476

Query: 409 KFEFAEEASVAGSPLISCN---QGLEPASLVDGLSKFSKHSPLGSGKHDNSMDDIVTVNA 465
           K  F +  S   + + S N   QGL+  S VD   +   +  +G    +NS   +V+  +
Sbjct: 477 KASFTKLKSRKKTSVPSANGKSQGLKVTSQVDEPPEADDYFSIGKDGINNSNTCLVSKPS 536

Query: 466 AQELNVDAXXXXXXXXXXXPFTEGLLFPESTAPEPEQNEGVKEKTPQTSFIGLGKSSLFD 525
               N  A            F E  L   + +PE  Q + V + + + +   L +S +  
Sbjct: 537 GSTSNSLA------------FDE--LLSRNASPESVQCDNVCQNSSKMAVQSLSESKING 582

Query: 526 KSDDRDFGVEKSDLVVSDAVLPQHQQQDKQVPSSFEGKS----ETEKCQTSDNLEELHEG 581
           K D    G+++    V    + QH        SS   K     E+  C   D   E  E 
Sbjct: 583 KPDITGSGMQQ----VGGNEVEQHTVTKNLDCSSLGNKKSCNVESAGCTKLDLGTE--ES 636

Query: 582 NRNLVTKQGRKKTIARKTLGSRPKLNSTANQKGSIYSNIVSLQNDLTIVLPGER---TDH 638
           N+ LV+K  RKK++A+++LGS+PK+ +TA QK S+     +LQ +      G +   T  
Sbjct: 637 NK-LVSKSPRKKSVAKRSLGSKPKVGATAKQKKSLSLTKTTLQGEGETFSSGSKEVATGD 695

Query: 639 EKLYSANEPETSPDTFNVSAINEADKKNCTRTGDSFEIETNFMDDETEASEDKA------ 692
            +++     +  P  F+V+   E +  +    GD     T F+DDETEA +DK       
Sbjct: 696 ARMH-----QGCPQIFDVNKTTEQETVS-KNAGD----RTEFLDDETEAPDDKCEYELGM 745

Query: 693 ------VDLSHKADNEMELKQEGALHTT 714
                 V LS K D   E K E     T
Sbjct: 746 ALDEDLVHLSKKPDTAKEEKSEATYPAT 773



 Score =  162 bits (410), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 3/109 (2%)

Query: 849  GKTMVKSDKVSLKVKQKSWKNNPNCTPVREVSKQVKTEPVWFILSGHKLQRKEFQQVIRR 908
            G + +KS   + K+K K    NP+ T   E + +VKTE   FILSGH+LQRKEFQQVI+R
Sbjct: 936  GSSTIKSSVRTAKIKSKKSGLNPSIT---ESNTRVKTEAACFILSGHRLQRKEFQQVIKR 992

Query: 909  LKGKVCRDSHQWSYQATHFITPDPIRRTEKFFAAAASGRWILKTDYLTA 957
            LKG+VCRDSHQWSYQATHFI PDPIRRTEKFFAAAASGRWILKTD+LTA
Sbjct: 993  LKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKTDFLTA 1041


>Glyma02g01680.1 
          Length = 1062

 Score =  276 bits (706), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 160/336 (47%), Positives = 193/336 (57%), Gaps = 61/336 (18%)

Query: 1   MLDSNSPSKTFLGVRFVLFGFDSIHERQVRAKLLNGGGVDAGQYSQSCSHLIVDKIVYDD 60
           M+++   S+ F GVRFVL GF+ + E Q+R KL+NGGGVD GQY  SC+H+IVD I YDD
Sbjct: 1   MIEATYSSRMFRGVRFVLRGFNPVAENQIRFKLVNGGGVDVGQYGGSCTHVIVDNIAYDD 60

Query: 61  PLCVAARNDGKTLVTALWVDHSCDIGMAVDATSIMYRPPRDLNGIPGAKHLIMCLTGYQR 120
           P+CVAARND KT+VTALWV+HS DIGM VDATS+MYRP +DL+GIPGAK LIMCLTGY R
Sbjct: 61  PVCVAARNDRKTVVTALWVEHSADIGMPVDATSVMYRPLKDLDGIPGAKDLIMCLTGYLR 120

Query: 121 QDRDDIMTMVSLMGAQFSKPLVANKVTHLICYKFEGEKYELASKLKKIKLVNHRWLEDCL 180
                                               EKYELA+KL  IKLVNHRWLEDCL
Sbjct: 121 ------------------------------------EKYELANKLGTIKLVNHRWLEDCL 144

Query: 181 RDWELLPEDNYNKSGYEMEMMEAEAKDSEEDVEDITVKQSSHQITYKSP-HLKISTPKPC 239
           ++W LLPED YNKSG+E+E M  EAKDSEE+ ED  + QS  +   +SP   KI      
Sbjct: 145 KEWVLLPEDKYNKSGFELETMVEEAKDSEEEAEDSKLGQSGGRNRKQSPLGSKIGIAATP 204

Query: 240 QLPKSTGELPKMPQILSEPEGLPSAVNKDMLLT-PGRKHRIDTAVGIDNTCVSEVLACQV 298
            L KS                LP+  N +  LT PG K R D      N   S++ +   
Sbjct: 205 GLSKSV---------------LPNVNNGENSLTIPGNKSRPDQDSSFHNVDDSKI-SYWA 248

Query: 299 SGASNDAISVGLPDLQDRTPKSTK-------GCSDL 327
           S  S  +IS  LPD   +  +S         GC DL
Sbjct: 249 SDVSRHSISCQLPDKYVKISESKNADSPKAPGCQDL 284



 Score =  160 bits (405), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/109 (70%), Positives = 86/109 (78%), Gaps = 3/109 (2%)

Query: 849 GKTMVKSDKVSLKVKQKSWKNNPNCTPVREVSKQVKTEPVWFILSGHKLQRKEFQQVIRR 908
           G   +KS     K+K K    NP+ T   E + +VKTE   FILSGH+LQRKEFQQVI+R
Sbjct: 797 GNPTIKSSVRPAKIKSKKSGLNPSIT---ESNTRVKTEAACFILSGHRLQRKEFQQVIKR 853

Query: 909 LKGKVCRDSHQWSYQATHFITPDPIRRTEKFFAAAASGRWILKTDYLTA 957
           LKG+VCRDSHQWSYQATHFI PDPIRRTEKFFAAAASGRWILKTD+LTA
Sbjct: 854 LKGRVCRDSHQWSYQATHFIAPDPIRRTEKFFAAAASGRWILKTDFLTA 902



 Score = 58.2 bits (139), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 34/201 (16%)

Query: 491 LFPESTAPEPEQNEGVKEKTPQTSFIGLGKSSLFDKSDDRDFGVEKSDLVVSDAVLPQHQ 550
           LF  +  PE  Q + V + +P+T+   L +S +  K D  D G+++ D    D     + 
Sbjct: 454 LFSRNANPESVQCDNVCQNSPKTAVQSLSESKINGKPDITDSGMQQVD---GDEAEQHNV 510

Query: 551 QQDKQVPSSFEGKSETEKCQTSDNLEELHEGNRNLVTKQGRKKTIARKTLGSRPKLNSTA 610
            ++    S    KS   +      L+ + E +  LV    RKK++A+++LGS+PKL +TA
Sbjct: 511 TRNLDCSSLGNKKSCNVESAGCTKLDLITEESNKLVRNSPRKKSVAKRSLGSKPKLGATA 570

Query: 611 NQKGSIYSNIVSLQNDLTIVLPGERTDHEKLYSANEPETSPDTFNVSAINEADKKNCTRT 670
            QK S+     SLQ        GE     K                    E   KN    
Sbjct: 571 KQKKSLSLTKTSLQ--------GEGVTCSK-------------------QEIVGKNAEDA 603

Query: 671 GDSFEIETNFMDDETEASEDK 691
           GD     T F+DDETEA +DK
Sbjct: 604 GD----RTEFLDDETEAPDDK 620


>Glyma19g05660.1 
          Length = 468

 Score = 79.7 bits (195), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 63/89 (70%), Gaps = 3/89 (3%)

Query: 111 LIMCLTGYQRQDRDDIMTMVSLMGAQFSKPLVANKVTHLICYKFEGEKYELASKLKKIKL 170
           ++  ++GY   +R +++ ++S  G  +   + +  +THL+C+KFEG+KY++A K + I +
Sbjct: 4   VVATVSGYHGSERFNLIKLISQAGGNYVGAM-SKSITHLVCWKFEGKKYDIALKFR-IHV 61

Query: 171 VNHRWLEDCLRDWELLPEDNYN-KSGYEM 198
           VNHRW+EDC+++   +PED+Y  +SG+E+
Sbjct: 62  VNHRWVEDCIKEGRRVPEDSYTLQSGHEV 90


>Glyma16g00740.1 
          Length = 764

 Score = 59.7 bits (143), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 7/157 (4%)

Query: 36  GGGVDAGQYSQSCSHLIVDKIVYDDPLCVAARNDGKTLVTALWVDHSCDIGMAVDATS-I 94
           GG + +GQ  QS  + I    V   P     R+     +++ W+    + G  +D  S I
Sbjct: 445 GGEIISGQTKQSTYYTIECHGV--TP--TLTRDSKSLYISSHWIRSCLEAGSLLDVDSHI 500

Query: 95  MYRPPRDLNGIPGAKHLIMCLTGYQRQDRDDIMTMVSLMGAQFSKPLVANKVTHLICYKF 154
           +Y P      +PG +    C + Y  +DR+ +  +   +GA++ + L   KVTHL+C   
Sbjct: 501 LYSPLPCRVPLPGFESFRFCFSQYDEKDRNLLRNLCFHLGAKYGEKL-TKKVTHLLCKFT 559

Query: 155 EGEKYELASKLKKIKLVNHRWLEDCLRDWELLPEDNY 191
            G KYE A K   I+ V   W+ +C++   ++  D +
Sbjct: 560 NGPKYEAACKW-GIQSVTSEWIFECVKQNGVVAIDQF 595