Jatropha Genome Database

JcCA0152151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152151.10 + phase: 0 
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g00790.1                                                       158   1e-39
Glyma04g00770.1                                                       156   5e-39
Glyma04g00770.3                                                       156   6e-39
Glyma04g00770.2                                                       156   6e-39
Glyma06g00800.1                                                       131   2e-31
Glyma04g00780.1                                                        94   3e-20
Glyma04g00770.4                                                        53   6e-08
Glyma04g00770.5                                                        53   6e-08

>Glyma06g00790.1 
          Length = 266

 Score =  158 bits (400), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 77/96 (80%), Positives = 88/96 (91%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           VGKLSTGDSLDM+ QDE++I ANDA VKDMEGAA+AYV+DLLKVP +FVKAVTD++DGDK
Sbjct: 171 VGKLSTGDSLDMTQQDESSIIANDATVKDMEGAAIAYVSDLLKVPAMFVKAVTDIIDGDK 230

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PTAEEFLQNLAAVTAAL+ AV Q I+FI GKC+SEL
Sbjct: 231 PTAEEFLQNLAAVTAALDLAVEQVINFINGKCVSEL 266


>Glyma04g00770.1 
          Length = 265

 Score =  156 bits (394), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 77/96 (80%), Positives = 86/96 (89%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           VGKLSTGDSLDM+ QDE++I ANDA VKDMEGAA+AYV+DLLKVP IFVKAVTD++DGDK
Sbjct: 170 VGKLSTGDSLDMTQQDESSIIANDATVKDMEGAAIAYVSDLLKVPAIFVKAVTDIIDGDK 229

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PTAEEFLQNLAAVT AL+ AV Q I+FI GKC SEL
Sbjct: 230 PTAEEFLQNLAAVTTALDLAVEQVINFINGKCESEL 265


>Glyma04g00770.3 
          Length = 213

 Score =  156 bits (394), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/96 (80%), Positives = 86/96 (89%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           VGKLSTGDSLDM+ QDE++I ANDA VKDMEGAA+AYV+DLLKVP IFVKAVTD++DGDK
Sbjct: 118 VGKLSTGDSLDMTQQDESSIIANDATVKDMEGAAIAYVSDLLKVPAIFVKAVTDIIDGDK 177

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PTAEEFLQNLAAVT AL+ AV Q I+FI GKC SEL
Sbjct: 178 PTAEEFLQNLAAVTTALDLAVEQVINFINGKCESEL 213


>Glyma04g00770.2 
          Length = 233

 Score =  156 bits (394), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 77/96 (80%), Positives = 86/96 (89%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           VGKLSTGDSLDM+ QDE++I ANDA VKDMEGAA+AYV+DLLKVP IFVKAVTD++DGDK
Sbjct: 138 VGKLSTGDSLDMTQQDESSIIANDATVKDMEGAAIAYVSDLLKVPAIFVKAVTDIIDGDK 197

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
           PTAEEFLQNLAAVT AL+ AV Q I+FI GKC SEL
Sbjct: 198 PTAEEFLQNLAAVTTALDLAVEQVINFINGKCESEL 233


>Glyma06g00800.1 
          Length = 253

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/96 (70%), Positives = 76/96 (79%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDK 61
           V KLSTGDSLDM+ QD + I ANDA V DMEGAA+AYVADLLKVP IF+KAVT+ VD DK
Sbjct: 158 VAKLSTGDSLDMTQQDGSLIIANDATVIDMEGAAIAYVADLLKVPAIFIKAVTNNVDDDK 217

Query: 62  PTAEEFLQNLAAVTAALEQAVTQAIDFIKGKCLSEL 97
              EEFLQNLAA+T  L  AV Q I+FI GKC+SEL
Sbjct: 218 AIVEEFLQNLAALTVELGLAVEQVINFINGKCISEL 253


>Glyma04g00780.1 
          Length = 107

 Score = 94.4 bits (233), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/64 (70%), Positives = 53/64 (82%)

Query: 13 MSPQDEATITANDAVVKDMEGAAVAYVADLLKVPTIFVKAVTDVVDGDKPTAEEFLQNLA 72
          M+ QDE++I ANDA V DMEGAA+AYVAD+LKVP IF+KAV  +VDGDK   EEFLQNL 
Sbjct: 1  MTEQDESSIIANDATVIDMEGAAIAYVADILKVPAIFIKAVNSIVDGDKAIVEEFLQNLE 60

Query: 73 AVTA 76
          A+TA
Sbjct: 61 ALTA 64


>Glyma04g00770.4 
          Length = 208

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDME 32
           VGKLSTGDSLDM+ QDE++I ANDA VKDME
Sbjct: 170 VGKLSTGDSLDMTQQDESSIIANDATVKDME 200


>Glyma04g00770.5 
          Length = 201

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/31 (80%), Positives = 28/31 (90%)

Query: 2   VGKLSTGDSLDMSPQDEATITANDAVVKDME 32
           VGKLSTGDSLDM+ QDE++I ANDA VKDME
Sbjct: 170 VGKLSTGDSLDMTQQDESSIIANDATVKDME 200