Jatropha Genome Database

JcCA0152091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152091.10 - phase: 0 
         (223 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g25880.2                                                       345   3e-95
Glyma06g25880.1                                                       342   2e-94
Glyma15g12230.1                                                        94   2e-19
Glyma15g12230.2                                                        93   2e-19
Glyma09g01380.1                                                        93   2e-19
Glyma07g39620.1                                                        90   2e-18
Glyma07g39620.2                                                        77   2e-14
Glyma04g01170.3                                                        59   4e-09
Glyma04g01170.1                                                        59   5e-09
Glyma06g01210.1                                                        56   3e-08

>Glyma06g25880.2 
          Length = 306

 Score =  345 bits (884), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 169/208 (81%), Positives = 180/208 (86%), Gaps = 17/208 (8%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVGDTLSDYLWCIDPLDGTTNFAHGYPSFAV 65
            TDKMSEAAILEVV+KNF DHLILGEEGGV+GD  SDYLWCIDPLDGTTNFAHGYPSFAV
Sbjct: 111 ETDKMSEAAILEVVKKNFEDHLILGEEGGVIGDAASDYLWCIDPLDGTTNFAHGYPSFAV 170

Query: 66  SVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSLLVT 125
           SVGVLYRG+P AAAVVEFVGG M WNTRLFSATAGGGAFCNGQ+I VS T++VERSLLVT
Sbjct: 171 SVGVLYRGNPAAAAVVEFVGGSMCWNTRLFSATAGGGAFCNGQRIQVSATNQVERSLLVT 230

Query: 126 GFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVALGI 185
           GFGYDHDDAWATNI+LFKE+TD+SR                GVRRLGAAAVDMCHVALGI
Sbjct: 231 GFGYDHDDAWATNIDLFKEFTDVSR----------------GVRRLGAAAVDMCHVALGI 274

Query: 186 VEAYWEYRLKPWDMAAGVLVKF-FILLD 212
           VEAYWEYRLKPWDMAAGVLV F F ++D
Sbjct: 275 VEAYWEYRLKPWDMAAGVLVCFEFYIID 302


>Glyma06g25880.1 
          Length = 359

 Score =  342 bits (877), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 165/200 (82%), Positives = 175/200 (87%), Gaps = 16/200 (8%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVGDTLSDYLWCIDPLDGTTNFAHGYPSFAV 65
            TDKMSEAAILEVV+KNF DHLILGEEGGV+GD  SDYLWCIDPLDGTTNFAHGYPSFAV
Sbjct: 111 ETDKMSEAAILEVVKKNFEDHLILGEEGGVIGDAASDYLWCIDPLDGTTNFAHGYPSFAV 170

Query: 66  SVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSLLVT 125
           SVGVLYRG+P AAAVVEFVGG M WNTRLFSATAGGGAFCNGQ+I VS T++VERSLLVT
Sbjct: 171 SVGVLYRGNPAAAAVVEFVGGSMCWNTRLFSATAGGGAFCNGQRIQVSATNQVERSLLVT 230

Query: 126 GFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVALGI 185
           GFGYDHDDAWATNI+LFKE+TD+SR                GVRRLGAAAVDMCHVALGI
Sbjct: 231 GFGYDHDDAWATNIDLFKEFTDVSR----------------GVRRLGAAAVDMCHVALGI 274

Query: 186 VEAYWEYRLKPWDMAAGVLV 205
           VEAYWEYRLKPWDMAAGVL+
Sbjct: 275 VEAYWEYRLKPWDMAAGVLM 294


>Glyma15g12230.1 
          Length = 270

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVGDT--LSDY-LWCIDPLDGTTNFAHGYPS 62
            TDK  E  I   +++ +  H  +GEE      T  L+D   W +DPLDGTTNF HG+P 
Sbjct: 46  ETDKACEELIFNHLKQLYPTHKFIGEETTAAYGTTELTDEPTWIVDPLDGTTNFVHGFPF 105

Query: 63  FAVSVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSL 122
             VS+G+     PT   V      +      LF+   G GAF NG  I VS   ++  SL
Sbjct: 106 VCVSIGLTIGKTPTIGVV------YNPIINELFTGIHGKGAFLNGNPIKVSSQTELISSL 159

Query: 123 LVTGFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVA 182
           L T  G   D          KE  D S   +   LF+        +R  G+ A+++C +A
Sbjct: 160 LATEAGTKRD----------KETVDASTDRIKSLLFKV-----RSLRMSGSCALNLCGIA 204

Query: 183 LGIVEAYWEYRL-KPWDMAAGVLV 205
            G ++ ++E     PWD+A G ++
Sbjct: 205 CGRLDVFFELGFGGPWDVAGGAVI 228


>Glyma15g12230.2 
          Length = 240

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVGDT--LSDY-LWCIDPLDGTTNFAHGYPS 62
            TDK  E  I   +++ +  H  +GEE      T  L+D   W +DPLDGTTNF HG+P 
Sbjct: 46  ETDKACEELIFNHLKQLYPTHKFIGEETTAAYGTTELTDEPTWIVDPLDGTTNFVHGFPF 105

Query: 63  FAVSVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSL 122
             VS+G+     PT   V      +      LF+   G GAF NG  I VS   ++  SL
Sbjct: 106 VCVSIGLTIGKTPTIGVV------YNPIINELFTGIHGKGAFLNGNPIKVSSQTELISSL 159

Query: 123 LVTGFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVA 182
           L T  G   D          KE  D S   +   LF+        +R  G+ A+++C +A
Sbjct: 160 LATEAGTKRD----------KETVDASTDRIKSLLFKV-----RSLRMSGSCALNLCGIA 204

Query: 183 LGIVEAYWEYRL-KPWDMAAGVLV 205
            G ++ ++E     PWD+A G ++
Sbjct: 205 CGRLDVFFELGFGGPWDVAGGAVI 228


>Glyma09g01380.1 
          Length = 270

 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 25/204 (12%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVGDT--LSDY-LWCIDPLDGTTNFAHGYPS 62
            TDK  E  I   +++ +  H  +GEE      T  L+D   W +DPLDGTTNF HG+P 
Sbjct: 46  ETDKACEELIFNNLKQLYPTHKFIGEETTAAYGTTELTDEPTWIVDPLDGTTNFVHGFPF 105

Query: 63  FAVSVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSL 122
             VS+G+     PT   V      +      LF+   G GAF NG  I VS   ++  SL
Sbjct: 106 VCVSIGLTIGKTPTIGVV------YNPIINELFTGIRGKGAFLNGNPIKVSSQTELISSL 159

Query: 123 LVTGFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVA 182
           L T  G   D          +E  D S   +   LF+        +R  G+ A+++C +A
Sbjct: 160 LATEAGTKRD----------QETVDASTNRIKSLLFKV-----RSLRMSGSCALNLCGIA 204

Query: 183 LGIVEAYWEYRL-KPWDMAAGVLV 205
            G ++ ++E     PWD+A G ++
Sbjct: 205 CGRLDVFFELGFGGPWDVAGGAVI 228


>Glyma07g39620.1 
          Length = 270

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 25/204 (12%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVG---DTLSDYLWCIDPLDGTTNFAHGYPS 62
            TD+  E  I   +++ +  H  +GEE    G   +   +  W +DPLDGTTNF HG+P 
Sbjct: 46  ETDQACEDLIFTHLKQLYSTHKFIGEETTAAGGNAELTDEPTWIVDPLDGTTNFVHGFPF 105

Query: 63  FAVSVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSL 122
             VS+G+     PT   V      +      LF+   G GAF NG  I VS   ++  +L
Sbjct: 106 VCVSIGLTIGKVPTVGVV------YNPIINELFTGIRGKGAFLNGNPIKVSSQTELMSAL 159

Query: 123 LVTGFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVA 182
           LVT  G   D          K   D     ++  LF+        +R  G+ A+++C +A
Sbjct: 160 LVTEVGTKRD----------KLTIDACTNRINSLLFKV-----RSLRMTGSCALNLCGIA 204

Query: 183 LGIVEAYWEYRL-KPWDMAAGVLV 205
            G ++  +E     PWD+A G ++
Sbjct: 205 CGRLDVCFELGFGGPWDVAGGAVI 228


>Glyma07g39620.2 
          Length = 247

 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 84/204 (41%), Gaps = 48/204 (23%)

Query: 6   RTDKMSEAAILEVVRKNFGDHLILGEEGGVVG---DTLSDYLWCIDPLDGTTNFAHGYPS 62
            TD+  E  I   +++ +  H  +GEE    G   +   +  W +DPLDGTTNF HG+P 
Sbjct: 46  ETDQACEDLIFTHLKQLYSTHKFIGEETTAAGGNAELTDEPTWIVDPLDGTTNFVHGFPF 105

Query: 63  FAVSVGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSL 122
             VS+G+     PT   V      +      LF+   G GAF NG  I VS   ++  +L
Sbjct: 106 VCVSIGLTIGKVPTVGVV------YNPIINELFTGIRGKGAFLNGNPIKVSSQTELMSAL 159

Query: 123 LVTGFGYDHDDAWATNIELFKEYTDISRVLLSIFLFQFARVSDSGVRRLGAAAVDMCHVA 182
           LVT                                          +R  G+ A+++C +A
Sbjct: 160 LVTEV--------------------------------------RSLRMTGSCALNLCGIA 181

Query: 183 LGIVEAYWEYRL-KPWDMAAGVLV 205
            G ++  +E     PWD+A G ++
Sbjct: 182 CGRLDVCFELGFGGPWDVAGGAVI 205


>Glyma04g01170.3 
          Length = 295

 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 8   DKMSEAAILEVVRKNFGDHLILGEEGG-VVGDTLSDYLWCIDPLDGTTNFAHGYPSFAVS 66
           D+ +E A++ ++  NF  H I GEE G    +  +DY+W +DP+DGT +F  G P F   
Sbjct: 73  DQSAEEAMVSIILDNFPSHAIYGEENGWRCEEKNADYVWVLDPIDGTKSFITGKPVFGTL 132

Query: 67  VGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSLLVT 125
           V +L  G P    + + V          +   AG     NGQ+I       + ++ L T
Sbjct: 133 VALLQNGTPILGIIDQPV------LRERWIGIAGKRTSLNGQEISTRTCADLSQAYLYT 185


>Glyma04g01170.1 
          Length = 303

 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 8   DKMSEAAILEVVRKNFGDHLILGEEGG-VVGDTLSDYLWCIDPLDGTTNFAHGYPSFAVS 66
           D+ +E A++ ++  NF  H I GEE G    +  +DY+W +DP+DGT +F  G P F   
Sbjct: 73  DQSAEEAMVSIILDNFPSHAIYGEENGWRCEEKNADYVWVLDPIDGTKSFITGKPVFGTL 132

Query: 67  VGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSLLVT 125
           V +L  G P    + + V          +   AG     NGQ+I       + ++ L T
Sbjct: 133 VALLQNGTPILGIIDQPV------LRERWIGIAGKRTSLNGQEISTRTCADLSQAYLYT 185


>Glyma06g01210.1 
          Length = 273

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 7/119 (5%)

Query: 8   DKMSEAAILEVVRKNFGDHLILGEEGG-VVGDTLSDYLWCIDPLDGTTNFAHGYPSFAVS 66
           D+ +E A++ ++  +F  H I GEE G    +  +DY+W +DP+DGT +F  G P F   
Sbjct: 51  DQSAEEAMVSIILDSFPSHAIYGEENGWRCKEKNTDYVWVLDPIDGTKSFITGKPVFGSL 110

Query: 67  VGVLYRGHPTAAAVVEFVGGHMAWNTRLFSATAGGGAFCNGQKIYVSQTDKVERSLLVT 125
           V +L  G P    + + V        R    T G     NGQ+I       + ++ L T
Sbjct: 111 VALLQNGTPILGIIDQPV-----LRERWIGIT-GKRTTLNGQEISTRTCADLSQAYLYT 163