Jatropha Genome Database

JcCA0152031.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152031.30 + phase: 0 
         (188 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g44810.1                                                       208   2e-54
Glyma08g44810.2                                                       181   4e-46

>Glyma08g44810.1 
          Length = 198

 Score =  208 bits (530), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 102/184 (55%), Positives = 131/184 (71%)

Query: 1   MESIVKKYQQRFRKVREEMDKWDHLQSRLLSQFINASSIISRLQVIRDSNNYGNLSGVDG 60
           ME+IVKK+Q +FRKVREEM +WD LQS L+SQF NAS I+ RLQV+++SNNYG L+   G
Sbjct: 1   MEAIVKKFQSKFRKVREEMSRWDELQSCLISQFRNASHIVDRLQVLQNSNNYGVLNCASG 60

Query: 61  IVDAVLRKQMDSLETILLSMNKTLEDFRSIVLFLEKMYKDGRQLVKGGPNQLTTKQLQQR 120
           + DA+L KQ++SL  IL+SM KTLE+F  IVL L+K+++D RQ VKGG   L  KQLQQ+
Sbjct: 61  LKDALLVKQIESLRNILVSMRKTLEEFHCIVLSLDKIHRDSRQQVKGGSCHLNMKQLQQQ 120

Query: 121 VGVKPCLADCLDGLMILHDMHRSEYXXXXXXXXXXXXXXXXPSSGDLAALQQLMVDQPNI 180
           +G+KP L  CLD LM +H+++ SEY                PS  DL ALQQL+VDQPN+
Sbjct: 121 IGIKPSLIYCLDSLMFIHEIYNSEYLLKSSVISALSEIALKPSDSDLGALQQLLVDQPNL 180

Query: 181 PKEE 184
             EE
Sbjct: 181 QTEE 184


>Glyma08g44810.2 
          Length = 171

 Score =  181 bits (459), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 86/145 (59%), Positives = 113/145 (77%)

Query: 1   MESIVKKYQQRFRKVREEMDKWDHLQSRLLSQFINASSIISRLQVIRDSNNYGNLSGVDG 60
           ME+IVKK+Q +FRKVREEM +WD LQS L+SQF NAS I+ RLQV+++SNNYG L+   G
Sbjct: 1   MEAIVKKFQSKFRKVREEMSRWDELQSCLISQFRNASHIVDRLQVLQNSNNYGVLNCASG 60

Query: 61  IVDAVLRKQMDSLETILLSMNKTLEDFRSIVLFLEKMYKDGRQLVKGGPNQLTTKQLQQR 120
           + DA+L KQ++SL  IL+SM KTLE+F  IVL L+K+++D RQ VKGG   L  KQLQQ+
Sbjct: 61  LKDALLVKQIESLRNILVSMRKTLEEFHCIVLSLDKIHRDSRQQVKGGSCHLNMKQLQQQ 120

Query: 121 VGVKPCLADCLDGLMILHDMHRSEY 145
           +G+KP L  CLD LM +H+++ SEY
Sbjct: 121 IGIKPSLIYCLDSLMFIHEIYNSEY 145