Jatropha Genome Database

JcCA0152031.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152031.20 - phase: 0 
         (229 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33370.2                                                       169   2e-42
Glyma19g33370.1                                                       169   2e-42
Glyma03g30450.3                                                       157   7e-39
Glyma03g30450.1                                                       157   7e-39
Glyma03g30450.2                                                       155   2e-38
Glyma19g33370.3                                                       108   3e-24

>Glyma19g33370.2 
          Length = 206

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 20/175 (11%)

Query: 41  VLRFLDSMDSYLTLFDSLSHTLRQGWLELAGARHSMGASRINSALLDLKVHSASTLLQVS 100
           VL+F+DSMD+YL+LFD++S TLRQGW +LA ARHSMGASRINS+LLDLK HSA+T L+++
Sbjct: 41  VLQFMDSMDNYLSLFDAVSSTLRQGWFDLASARHSMGASRINSSLLDLKFHSAATTLKIT 100

Query: 101 EGHDSMEEQPHFILRKWGSLDCSRYQNSKEGELQAKPGSPRLRQRGNSQVSEEITSPKQA 160
             +D    QP F+LRKW S +    Q   E  +Q++ GS                S K +
Sbjct: 101 -NYDGT--QPCFMLRKWVSSEHESSQLEDEN-VQSQDGS----------------SVKSS 140

Query: 161 ALKVDDQVQKERSRSLSVFGTLVSPKLRDAQLSFETALETIVEIANMRSEMLSAF 215
            L  + +VQ ERS+SLS+FG L+SPKLR +QLSFE ALET++EIANM+S +L +F
Sbjct: 141 GLVENAEVQNERSKSLSIFGVLISPKLRASQLSFEKALETLIEIANMQSSLLYSF 195


>Glyma19g33370.1 
          Length = 206

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/175 (53%), Positives = 123/175 (70%), Gaps = 20/175 (11%)

Query: 41  VLRFLDSMDSYLTLFDSLSHTLRQGWLELAGARHSMGASRINSALLDLKVHSASTLLQVS 100
           VL+F+DSMD+YL+LFD++S TLRQGW +LA ARHSMGASRINS+LLDLK HSA+T L+++
Sbjct: 41  VLQFMDSMDNYLSLFDAVSSTLRQGWFDLASARHSMGASRINSSLLDLKFHSAATTLKIT 100

Query: 101 EGHDSMEEQPHFILRKWGSLDCSRYQNSKEGELQAKPGSPRLRQRGNSQVSEEITSPKQA 160
             +D    QP F+LRKW S +    Q   E  +Q++ GS                S K +
Sbjct: 101 -NYDGT--QPCFMLRKWVSSEHESSQLEDEN-VQSQDGS----------------SVKSS 140

Query: 161 ALKVDDQVQKERSRSLSVFGTLVSPKLRDAQLSFETALETIVEIANMRSEMLSAF 215
            L  + +VQ ERS+SLS+FG L+SPKLR +QLSFE ALET++EIANM+S +L +F
Sbjct: 141 GLVENAEVQNERSKSLSIFGVLISPKLRASQLSFEKALETLIEIANMQSSLLYSF 195


>Glyma03g30450.3 
          Length = 205

 Score =  157 bits (398), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 120/180 (66%), Gaps = 20/180 (11%)

Query: 41  VLRFLDSMDSYLTLFDSLSHTLRQGWLELAGARHSMGASRINSALLDLKVHSASTLLQVS 100
           VL+F+DSMD+YL+LFD +S TLRQGW +LA ARHSMGASRINS+LLDLK+HSA+T L+++
Sbjct: 40  VLQFMDSMDNYLSLFDVVSSTLRQGWFDLASARHSMGASRINSSLLDLKLHSAATTLKIT 99

Query: 101 EGHDSMEEQPHFILRKWGSLDCSRYQNSKEGELQAKPGSPRLRQRGNSQVSEEITSPKQA 160
             +D    QP F+L KW S +    Q   E                N Q  +  +  K +
Sbjct: 100 -NYDGT--QPRFMLHKWVSSEHESTQLEDE----------------NVQSQDSSSV-KSS 139

Query: 161 ALKVDDQVQKERSRSLSVFGTLVSPKLRDAQLSFETALETIVEIANMRSEMLSAFDGVNK 220
            L  + +VQ ERS+SLSVFG L+SPKLR +QLSFE ALET++EIAN++  +L +F  + K
Sbjct: 140 GLADNAEVQNERSKSLSVFGVLISPKLRASQLSFEKALETLIEIANLQKSLLYSFHQLQK 199


>Glyma03g30450.1 
          Length = 205

 Score =  157 bits (398), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/180 (50%), Positives = 120/180 (66%), Gaps = 20/180 (11%)

Query: 41  VLRFLDSMDSYLTLFDSLSHTLRQGWLELAGARHSMGASRINSALLDLKVHSASTLLQVS 100
           VL+F+DSMD+YL+LFD +S TLRQGW +LA ARHSMGASRINS+LLDLK+HSA+T L+++
Sbjct: 40  VLQFMDSMDNYLSLFDVVSSTLRQGWFDLASARHSMGASRINSSLLDLKLHSAATTLKIT 99

Query: 101 EGHDSMEEQPHFILRKWGSLDCSRYQNSKEGELQAKPGSPRLRQRGNSQVSEEITSPKQA 160
             +D    QP F+L KW S +    Q   E                N Q  +  +  K +
Sbjct: 100 -NYDGT--QPRFMLHKWVSSEHESTQLEDE----------------NVQSQDSSSV-KSS 139

Query: 161 ALKVDDQVQKERSRSLSVFGTLVSPKLRDAQLSFETALETIVEIANMRSEMLSAFDGVNK 220
            L  + +VQ ERS+SLSVFG L+SPKLR +QLSFE ALET++EIAN++  +L +F  + K
Sbjct: 140 GLADNAEVQNERSKSLSVFGVLISPKLRASQLSFEKALETLIEIANLQKSLLYSFHQLQK 199


>Glyma03g30450.2 
          Length = 202

 Score =  155 bits (393), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/183 (46%), Positives = 117/183 (63%), Gaps = 29/183 (15%)

Query: 41  VLRFLDSMDSYLTLFDSLSHTLRQGWLELAGARHSMGASRINSALLDLKVHSASTLLQVS 100
           VL+F+DSMD+YL+LFD +S TLRQGW +LA ARHSMGASRINS+LLDLK+HSA+T L+++
Sbjct: 40  VLQFMDSMDNYLSLFDVVSSTLRQGWFDLASARHSMGASRINSSLLDLKLHSAATTLKIT 99

Query: 101 EGHDSMEEQPHFILRKWGSLDCSRYQNSKEGELQAKPGSPRLRQRGNSQVSEE---ITSP 157
             +D    QP F+L KW S                        +  ++Q+ +E       
Sbjct: 100 -NYDGT--QPRFMLHKWVS-----------------------SEHESTQLEDENVQSQDS 133

Query: 158 KQAALKVDDQVQKERSRSLSVFGTLVSPKLRDAQLSFETALETIVEIANMRSEMLSAFDG 217
                  + +VQ ERS+SLSVFG L+SPKLR +QLSFE ALET++EIAN++  +L +F  
Sbjct: 134 SSVKSSDNAEVQNERSKSLSVFGVLISPKLRASQLSFEKALETLIEIANLQKSLLYSFHQ 193

Query: 218 VNK 220
           + K
Sbjct: 194 LQK 196


>Glyma19g33370.3 
          Length = 150

 Score =  108 bits (271), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 52/79 (65%), Positives = 66/79 (83%), Gaps = 3/79 (3%)

Query: 41  VLRFLDSMDSYLTLFDSLSHTLRQGWLELAGARHSMGASRINSALLDLKVHSASTLLQVS 100
           VL+F+DSMD+YL+LFD++S TLRQGW +LA ARHSMGASRINS+LLDLK HSA+T L+++
Sbjct: 41  VLQFMDSMDNYLSLFDAVSSTLRQGWFDLASARHSMGASRINSSLLDLKFHSAATTLKIT 100

Query: 101 EGHDSMEEQPHFILRKWGS 119
             +D    QP F+LRKW S
Sbjct: 101 -NYDGT--QPCFMLRKWVS 116