Jatropha Genome Database

JcCA0152031.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0152031.10 + phase: 0 /pseudo/partial
         (314 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g01930.1                                                       241   1e-63
Glyma04g01820.2                                                       236   4e-62
Glyma04g01820.1                                                       235   5e-62
Glyma14g00360.1                                                       149   3e-36

>Glyma06g01930.1 
          Length = 1076

 Score =  241 bits (614), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/253 (56%), Positives = 171/253 (67%), Gaps = 10/253 (3%)

Query: 1   MERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEG 60
           M +GGSADGILQVRA+RIQSDL+EL K       +  G           P GWQPGI EG
Sbjct: 649 MVQGGSADGILQVRAERIQSDLEELFKALA-ERCKKHGIDVKSITMVQLPAGWQPGIPEG 707

Query: 61  AAVWDEEWDKFEDEGFANDLML--DMKNVSAPNSKSTIQDGSPTHDSLSNGDDKSGNFSR 118
           AA+WDEEWDKFEDEGFANDL       N +  + +  + D +  H S  N + K  N + 
Sbjct: 708 AALWDEEWDKFEDEGFANDLTFASSKPNPAFIDGEQNLSDDNSVHGSPVNANGKQENSAN 767

Query: 119 VDGHGIEGESVYSHSEDELARSPQSSLAGRNALGSPSKAFSDV-FAKSTDADAETHRSFD 177
            D + +E ES Y+HSED+LARSP  SLAGR+ LGSPS+ FS+  F KS +ADAETHRSFD
Sbjct: 768 GD-YTVEDES-YAHSEDDLARSPH-SLAGRSTLGSPSRDFSNAHFGKSFEADAETHRSFD 824

Query: 178 ESTWGAFDTHDDTDSVWGFNPASTKDSDSDKHRDFFGIDDFGIKPIRTGSLSSESIFQKK 237
           ESTWGAFD ++D DSVWGFN   TKDSD ++  DFF  DDFGI P+RTGS  ++  FQ K
Sbjct: 825 ESTWGAFDNNEDVDSVWGFN-TKTKDSDFEQG-DFFKSDDFGINPVRTGSTHTDGTFQSK 882

Query: 238 SPF-FEDSVAGSP 249
           SPF F+DSV  +P
Sbjct: 883 SPFAFDDSVPATP 895


>Glyma04g01820.2 
          Length = 1061

 Score =  236 bits (601), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 142/256 (55%), Positives = 170/256 (66%), Gaps = 16/256 (6%)

Query: 1   MERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEG 60
           M +GGSADGILQVRA+RIQSDL+EL K       +  G           P GWQPGI EG
Sbjct: 655 MVQGGSADGILQVRAERIQSDLEELFKALA-ERCKKHGLDVKSITMVQLPAGWQPGIPEG 713

Query: 61  AAVWDEEWDKFEDEGFANDLMLDMKNVSAPNS-----KSTIQDGSPTHDSLSNGDDKSGN 115
           AA+WDE+WDKFEDEGFANDL       S P S     +  + D +  H S  N + K  N
Sbjct: 714 AALWDEDWDKFEDEGFANDLTY---TSSKPKSAFIDGEQNLSDDNSVHGSPVNANGKQEN 770

Query: 116 FSRVDGHGIEGESVYSHSEDELARSPQSSLAGRNALGSPSKAFSDV-FAKSTDADAETHR 174
            +  D + +E ES Y+HSED+LAR P S LAGR+ + SPS+ FS+  F KS +ADAETHR
Sbjct: 771 SANGD-YTVEDES-YAHSEDDLARIPHS-LAGRSTVESPSQDFSNSHFGKSFEADAETHR 827

Query: 175 SFDESTWGAFDTHDDTDSVWGFNPASTKDSDSDKHRDFFGIDDFGIKPIRTGSLSSESIF 234
           SFDESTWGAFD +DD DSVWGFN   TKDSD ++ RDFF  DDFGI P+RTGS  ++  F
Sbjct: 828 SFDESTWGAFDNNDDVDSVWGFN-TKTKDSDFEQ-RDFFKSDDFGINPVRTGSTHTDGTF 885

Query: 235 QKKSPF-FEDSVAGSP 249
           Q KSPF F+DSV  +P
Sbjct: 886 QTKSPFAFDDSVPATP 901


>Glyma04g01820.1 
          Length = 1062

 Score =  235 bits (599), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/256 (55%), Positives = 170/256 (66%), Gaps = 16/256 (6%)

Query: 1   MERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEG 60
           M +GGSADGILQVRA+RIQSDL+EL K       +  G           P GWQPGI EG
Sbjct: 655 MVQGGSADGILQVRAERIQSDLEELFKALA-ERCKKHGLDVKSITMVQLPAGWQPGIPEG 713

Query: 61  AAVWDEEWDKFEDEGFANDLMLDMKNVSAPNS-----KSTIQDGSPTHDSLSNGDDKSGN 115
           AA+WDE+WDKFEDEGFANDL       S P S     +  + D +  H S  N + K  N
Sbjct: 714 AALWDEDWDKFEDEGFANDLTY---TSSKPKSAFIDGEQNLSDDNSVHGSPVNANGKQEN 770

Query: 116 FSRVDGHGIEGESVYSHSEDELARSPQSSLAGRNALGSPSKAFSDV-FAKSTDADAETHR 174
            +  D + +E ES Y+HSED+LAR P S LAGR+ + SPS+ FS+  F KS +ADAETHR
Sbjct: 771 SANGD-YTVEDES-YAHSEDDLARIPHS-LAGRSTVESPSQDFSNSHFGKSFEADAETHR 827

Query: 175 SFDESTWGAFDTHDDTDSVWGFNPASTKDSDSDKHRDFFGIDDFGIKPIRTGSLSSESIF 234
           SFDESTWGAFD +DD DSVWGFN   TKDSD ++ RDFF  DDFGI P+RTGS  ++  F
Sbjct: 828 SFDESTWGAFDNNDDVDSVWGFN-TKTKDSDFEQ-RDFFKSDDFGINPVRTGSTHTDGTF 885

Query: 235 QKKSPF-FEDSVAGSP 249
           Q KSPF F+DSV  +P
Sbjct: 886 QTKSPFAFDDSVPATP 901


>Glyma14g00360.1 
          Length = 1020

 Score =  149 bits (376), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 143/306 (46%), Gaps = 58/306 (18%)

Query: 1   MERGGSADGILQVRADRIQSDLDELMKGFKLNVARDMGXRXXXXXXXXXPIGWQPGIQEG 60
           ME+ G  D  LQ   DRIQ+DLDEL+K       +  G R         P GWQPGIQEG
Sbjct: 624 MEQDGKGDATLQAHVDRIQTDLDELVKSLN-ERCKKYGLRAKPTTLLELPFGWQPGIQEG 682

Query: 61  AAVWDEEWDKFEDEG--FANDLMLDMKNVSAP---------NSKST-------------- 95
           AA WDE+WDK ED+   F  +L LD++N+  P         N+K+               
Sbjct: 683 AADWDEDWDKLEDKEFVFVKELTLDVQNIIVPPKQKLPSAVNTKAVNVEAVNTEAVNVEA 742

Query: 96  -----IQDGSPTHDSLSNGDDKSGNFSRVDGHGIEGESVYSHSEDELARSPQSSLAGRNA 150
                +   SPT  +    DDKS      +  G+   SVY+ SED   +S  +S    +A
Sbjct: 743 VNTEAVNTDSPTFVASPKSDDKSEKPRTTNEQGVGNGSVYNKSEDGSVKSAPNSPFASSA 802

Query: 151 LGSPSKAFSDVFAKSTDADA---------ETH-------------RSFDESTWGAFDTHD 188
           +GSP   F     K+   D+         ET              + FDE  WG FDT+D
Sbjct: 803 IGSPHGDFDSDIRKTAGEDSSLRDQDTIQETQSDHGGVKSVFSGDKIFDEPNWGTFDTND 862

Query: 189 DTDSVWGFNPAS----TKDSDSDKHRDFFGIDDFGIKPIRTGSLSSESIFQKKSPF-FED 243
           D DSVWGFN +S     +D D   +  FF   + G+ PI+TGS  +   FQ+ S F F+D
Sbjct: 863 DIDSVWGFNASSFTKEERDLDRAGNNYFFDSGELGLNPIKTGSPQAGDFFQRSSGFGFDD 922

Query: 244 SVAGSP 249
           SV  +P
Sbjct: 923 SVPSTP 928