Jatropha Genome Database

JcCA0151971.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151971.10 + phase: 0 /partial/short
         (49 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g37740.1                                                        69   1e-12
Glyma08g01850.1                                                        69   2e-12

>Glyma05g37740.1 
          Length = 727

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/49 (65%), Positives = 33/49 (67%)

Query: 1   VVAGKGHETYQIXXXXXXXXXXXXXXXXALQYVDELHQAGIDTSEFPWR 49
           VVAGKGHETYQ+                ALQYVDELHQAGIDTSEFPWR
Sbjct: 674 VVAGKGHETYQVEGDKKEFFDDREECREALQYVDELHQAGIDTSEFPWR 722


>Glyma08g01850.1 
          Length = 750

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/49 (65%), Positives = 33/49 (67%)

Query: 1   VVAGKGHETYQIXXXXXXXXXXXXXXXXALQYVDELHQAGIDTSEFPWR 49
           VVAGKGHETYQ+                ALQYVDELHQAGIDTSEFPWR
Sbjct: 697 VVAGKGHETYQVEGDKKEFFDDREECREALQYVDELHQAGIDTSEFPWR 745