Jatropha Genome Database

JcCA0151951.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151951.20 - phase: 0 
         (260 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g00890.1                                                       285   2e-77
Glyma17g11030.1                                                       263   1e-70

>Glyma05g00890.1 
          Length = 501

 Score =  285 bits (730), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 139/247 (56%), Positives = 180/247 (72%), Gaps = 8/247 (3%)

Query: 11  QMDPFDMRTLSSEMDINSLQQDVCMEENPLTESSEIPLIETSEIPPVTTEPEGSSGYVEF 70
           Q DPF++ TL +E+   S++ DV +EE P+ ES+++    +          +  S  +  
Sbjct: 260 QSDPFNLSTLEAEIKRESIKSDVALEEKPMQESTDLASSSSVS--------QPCSSSIAV 311

Query: 71  LKPDDVSISSIRAKFVPFFRGSQKMLLLHKNFILQLNCPHLRVRFGLSTKFSDHAGRPRL 130
           L+PD + I SI A  VP FRGSQ++ LLH+ F+ QL+C  L+VRFG+++KF D AGRPRL
Sbjct: 312 LEPDGICIPSIDASLVPSFRGSQRIELLHEGFLFQLHCTDLKVRFGINSKFFDSAGRPRL 371

Query: 131 SFVVDASPSLCGVLDACDNIAQQSYGESGSSSDWRPVVNRKPGYLNYPTARMHIPTIVNG 190
           SFVVD SPSLC VLDACD +AQ+   +SGSSSDWRPVV RK G+ NYPT R+HIPT V  
Sbjct: 372 SFVVDPSPSLCNVLDACDRVAQKLTVDSGSSSDWRPVVIRKEGFFNYPTVRLHIPTAVVA 431

Query: 191 EVAQYATEIYQKDPSGTTQKLVFSRFDAAELDTWFSPGTHIDAYFSLDTYDYQQSAGIRL 250
           ++A YATEIYQ++ SGT Q+L+FS+FDAAEL + F PGT +DA FSLD YDYQQ+AGI+L
Sbjct: 432 DIAIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAVFSLDPYDYQQNAGIKL 491

Query: 251 VAKKLFI 257
           VAKKL I
Sbjct: 492 VAKKLII 498


>Glyma17g11030.1 
          Length = 501

 Score =  263 bits (673), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 131/247 (53%), Positives = 171/247 (69%), Gaps = 8/247 (3%)

Query: 11  QMDPFDMRTLSSEMDINSLQQDVCMEENPLTESSEIPLIETSEIPPVTTEPEGSSGYVEF 70
           Q DPF++  L +E+   S++ D  MEE  + ES ++    +          +  S  +  
Sbjct: 260 QSDPFNLSALEAEIKRESIKSDAAMEEKTMQESPDLASSSSVS--------QPCSSSIAV 311

Query: 71  LKPDDVSISSIRAKFVPFFRGSQKMLLLHKNFILQLNCPHLRVRFGLSTKFSDHAGRPRL 130
           L+PD + I  I A  VP F GSQ++ LLH+ F   L+C  L+VRFG++++F D AGRPRL
Sbjct: 312 LEPDGICIPFIDASLVPSFLGSQRIELLHEGFPFLLHCTDLKVRFGINSRFFDRAGRPRL 371

Query: 131 SFVVDASPSLCGVLDACDNIAQQSYGESGSSSDWRPVVNRKPGYLNYPTARMHIPTIVNG 190
           SFVVD SPSLC VLDACD +AQ+   +SGSSSDWRPVV RK G+ NYPT R+HIPT V  
Sbjct: 372 SFVVDPSPSLCNVLDACDRVAQKLNMDSGSSSDWRPVVIRKEGFFNYPTIRLHIPTAVVA 431

Query: 191 EVAQYATEIYQKDPSGTTQKLVFSRFDAAELDTWFSPGTHIDAYFSLDTYDYQQSAGIRL 250
           +V  YATEIYQ++ SGT Q+L+FS+FDAAEL + F PGT +DA+ SLD YDYQQ+AGI+L
Sbjct: 432 DVDIYATEIYQRESSGTVQRLLFSKFDAAELGSLFMPGTFVDAFLSLDPYDYQQNAGIKL 491

Query: 251 VAKKLFI 257
           V+KKL I
Sbjct: 492 VSKKLII 498