Jatropha Genome Database

JcCA0151201.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151201.10 + phase: 0 /partial
         (138 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g03740.1                                                       253   3e-68
Glyma04g03650.1                                                       253   5e-68
Glyma14g08350.1                                                       243   5e-65
Glyma17g36690.1                                                       209   9e-55

>Glyma06g03740.1 
          Length = 709

 Score =  253 bits (647), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 122/137 (89%), Positives = 127/137 (92%)

Query: 2   HCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDTVAKRLACWISIQKCDK 61
           HCAPSEPSILQQLEEVVV+PNYHRLFPGGARKLFNIFGSSYCD  AKRLACWISIQKCDK
Sbjct: 573 HCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCDK 632

Query: 62  DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMKLSWLNRLGIRF 121
           DGD+RLRVCHSACQSYNLACGASLDCSDQTLFSS+ EGEGQCTGSGEMKLSW NRL   F
Sbjct: 633 DGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSDGEGEGQCTGSGEMKLSWFNRLRSSF 692

Query: 122 FSSNTSLKGMSVKYRQL 138
              N+SLKG+SVKYRQL
Sbjct: 693 SLRNSSLKGISVKYRQL 709


>Glyma04g03650.1 
          Length = 859

 Score =  253 bits (646), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 121/137 (88%), Positives = 127/137 (92%)

Query: 2   HCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDTVAKRLACWISIQKCDK 61
           HCAPSEPSILQQLEEVVV+PNYHRLFPGGARKLFNIFGSSYCD  AKRLACWISIQKCDK
Sbjct: 723 HCAPSEPSILQQLEEVVVIPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCDK 782

Query: 62  DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMKLSWLNRLGIRF 121
           DGD+RLRVCHSACQSYNLACGASLDCSDQTLFSS+ +GEGQCTGSGEMKLSW NRL   F
Sbjct: 783 DGDNRLRVCHSACQSYNLACGASLDCSDQTLFSSDGDGEGQCTGSGEMKLSWFNRLRSSF 842

Query: 122 FSSNTSLKGMSVKYRQL 138
              N+SLKG+SVKYRQL
Sbjct: 843 SLRNSSLKGISVKYRQL 859


>Glyma14g08350.1 
          Length = 860

 Score =  243 bits (620), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 117/137 (85%), Positives = 123/137 (89%)

Query: 2   HCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDTVAKRLACWISIQKCDK 61
           HCAPSE SILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCD  AKRLACWISIQKC+K
Sbjct: 724 HCAPSESSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDETAKRLACWISIQKCEK 783

Query: 62  DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMKLSWLNRLGIRF 121
           DGD+RLRVCHSACQ+YNLACGASLDC DQTLFSSE E EGQCTGSGEMKLSWLNRL   F
Sbjct: 784 DGDNRLRVCHSACQAYNLACGASLDCGDQTLFSSEGEDEGQCTGSGEMKLSWLNRLRNSF 843

Query: 122 FSSNTSLKGMSVKYRQL 138
              N+S KG+SV+YRQ 
Sbjct: 844 SLRNSSSKGISVRYRQF 860


>Glyma17g36690.1 
          Length = 843

 Score =  209 bits (531), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 100/111 (90%), Positives = 103/111 (92%)

Query: 2   HCAPSEPSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDTVAKRLACWISIQKCDK 61
           HCAPSE SILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCD  AKRLACWISIQKC+K
Sbjct: 725 HCAPSESSILQQLEEVVVMPNYHRLFPGGARKLFNIFGSSYCDEAAKRLACWISIQKCEK 784

Query: 62  DGDDRLRVCHSACQSYNLACGASLDCSDQTLFSSEEEGEGQCTGSGEMKLS 112
           DGD+RLRVCHSACQ+YNLACGASLDC DQTLFSSE   EG CTGSGEMKLS
Sbjct: 785 DGDNRLRVCHSACQAYNLACGASLDCGDQTLFSSEGGDEGLCTGSGEMKLS 835