Jatropha Genome Database

JcCA0151191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0151191.10 - phase: 0 
         (551 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g03280.1                                                       668   0.0  

>Glyma03g03280.1 
          Length = 602

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/473 (69%), Positives = 382/473 (80%), Gaps = 5/473 (1%)

Query: 68  QKLSQVIKYHNQTKHNFTNYARGPRGLDWANQPNPFRRYISAPLLSLQHFPTDNQTASSA 127
            KLS V+KYHNQTKH+FTNYARGP  LDWANQPNPFRRY+S+PLL L H   + QT +  
Sbjct: 29  HKLSHVLKYHNQTKHSFTNYARGPHNLDWANQPNPFRRYLSSPLLPLLHSEPNPQTLTLT 88

Query: 128 ADSAPLYHSIFNSLXXXXX-XXXXXXXQLFYDSLALSAWKTTGFSTWSLRVNPSSGNLHP 186
               PLYHS+F SL             QL +DSL+LSAWK+TGFSTWSLRVNPSSGNLHP
Sbjct: 89  ----PLYHSLFLSLPSPHPPVSKSTLSQLLFDSLSLSAWKSTGFSTWSLRVNPSSGNLHP 144

Query: 187 TEAYLIAPPIESLSSSSFVAHYAPKEHALELRATIPSDFFPKFFPRDSFLIGISSIFWRE 246
           TEAY++APPI  +S S+FVAHYAPKEH+LELRA IPS FFPKFFP +SFL+G+SS+FWRE
Sbjct: 145 TEAYVVAPPIPGVSDSAFVAHYAPKEHSLELRAEIPSGFFPKFFPPNSFLVGLSSVFWRE 204

Query: 247 AWKYGERAFRYCNHDVGHXXXXXXXXXXGLGWDVKLLDGLGHKELERLMGLEIYQSFQVP 306
           AWKYGERAFRYCNHDVGH          GLGWDVK+LD LG +EL+ LMGL ++  F++P
Sbjct: 205 AWKYGERAFRYCNHDVGHAIGAVAMAAAGLGWDVKVLDSLGCEELKSLMGLHVFPEFEIP 264

Query: 307 DGPIKGKIPDIEFEHSDCLLLVFPKGATDFDVNYKELSSALMEFKNLDWKGKPNLLSKEH 366
              ++GKIP+IEFEH DC++LV+P G   FDVN+KELS A++ F  LDWKGKPN LSKEH
Sbjct: 265 SRAVRGKIPEIEFEHPDCVMLVYPSGVGGFDVNWKELSEAILGFDKLDWKGKPNSLSKEH 324

Query: 367 VCWDIIYRTAEAVKKPLTLGERFLIDPFQGSGVCSDGSYKGFTVREIVRKRRSAVDMDGV 426
           VCW++IYRTAEAVKKPLTLGERFL++P Q SGVC + +YKG TVRE+VRKRRSAVDMDGV
Sbjct: 325 VCWEVIYRTAEAVKKPLTLGERFLVEPLQRSGVCGESAYKGLTVREVVRKRRSAVDMDGV 384

Query: 427 TKIDRETFYQILLHCVPSGSGTGESQKRQLALPFRVLSWDAEVHAALFVHRVTGLPKGLY 486
           T+I+R+ FYQILLHC+PSG   G  Q R+LALPFR L WDAEVHAALFVHRV GLP+GLY
Sbjct: 385 TEIERDAFYQILLHCLPSGCQGGGRQGRELALPFRALPWDAEVHAALFVHRVVGLPQGLY 444

Query: 487 FLVRNEDHFHELKKATRAGFKWEKPEGCPDDLPLYELARGDCQQIAKQLSCHQ 539
           FLVRNEDHF +LKKA    F W KPEGCPDDLPLYEL R DC+Q++KQLSCHQ
Sbjct: 445 FLVRNEDHFDKLKKAMLPDFLWTKPEGCPDDLPLYELLRLDCRQLSKQLSCHQ 497