Jatropha Genome Database

JcCA0149501.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149501.20 - phase: 0 /partial
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g23770.1                                                       145   7e-36
Glyma07g00620.1                                                       144   2e-35
Glyma15g18190.1                                                       140   3e-34
Glyma09g06900.1                                                       138   1e-33
Glyma15g00350.2                                                       136   5e-33
Glyma15g00350.1                                                       136   5e-33
Glyma13g44980.1                                                       133   4e-32

>Glyma08g23770.1 
          Length = 415

 Score =  145 bits (367), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 72/103 (69%), Positives = 86/103 (83%)

Query: 4   IMNLYLWKLLQESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAG 63
           + +L+     +ESI+P DKK KFL+SEDSE EKVIDFY+ S+SDVFVPAISGLFYANVAG
Sbjct: 313 LKDLFPKTYTKESIIPADKKKKFLDSEDSELEKVIDFYISSESDVFVPAISGLFYANVAG 372

Query: 64  KRIASGKTQILVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           KRI SGK+QILVPANIP +SAS ++  S Y+SKKNH AYSC+C
Sbjct: 373 KRIGSGKSQILVPANIPDSSASASSFLSHYVSKKNHFAYSCYC 415


>Glyma07g00620.1 
          Length = 416

 Score =  144 bits (362), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 86/103 (83%)

Query: 4   IMNLYLWKLLQESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAG 63
           + +L+     +ESI+P DKK ++L+SEDSE EKVIDFY+ S+SDVFVPAISGLFYANVAG
Sbjct: 314 LKDLFPKTYTKESIIPADKKKRYLDSEDSELEKVIDFYISSESDVFVPAISGLFYANVAG 373

Query: 64  KRIASGKTQILVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           KRI SGK+QILVPANIP +SAS ++  S Y+SKKNH AYSC+C
Sbjct: 374 KRIGSGKSQILVPANIPDSSASASSFLSHYVSKKNHFAYSCYC 416


>Glyma15g18190.1 
          Length = 420

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 77/93 (82%)

Query: 14  QESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAGKRIASGKTQI 73
           +E++M EDKK K L S+ SEFEKVIDFY+CSQS+VFVP+I GLFYANVAG RI SGK QI
Sbjct: 328 KETVMAEDKKGKSLSSQSSEFEKVIDFYICSQSEVFVPSIPGLFYANVAGMRIVSGKNQI 387

Query: 74  LVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           LVPA I   SAS +++ SPY+S+KNH AY+CFC
Sbjct: 388 LVPAEISSPSASASDYISPYVSQKNHFAYACFC 420


>Glyma09g06900.1 
          Length = 420

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 77/93 (82%)

Query: 14  QESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAGKRIASGKTQI 73
           +E++M EDKK KFL S+ SEFEKVIDFY+CS+S+VFVP+I GLFYANVAG RI SGK QI
Sbjct: 328 KETVMAEDKKGKFLRSKSSEFEKVIDFYICSKSEVFVPSIPGLFYANVAGMRILSGKNQI 387

Query: 74  LVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           LVPA I G SAS +++ S Y S+KNH AY+CFC
Sbjct: 388 LVPAEIAGPSASASDYISSYESQKNHFAYACFC 420


>Glyma15g00350.2 
          Length = 291

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 80/103 (77%), Gaps = 7/103 (6%)

Query: 4   IMNLYLWKLLQESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAG 63
           + +L+     +E+IMP DKK KFL   DSEFEKVIDFY+ ++SDVFVPAISGLFYANV G
Sbjct: 196 LKDLFPKTYTKEAIMPADKKKKFL---DSEFEKVIDFYVSAESDVFVPAISGLFYANVVG 252

Query: 64  KRIASGKTQILVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           KRI SGKT+ILVPA    TSAS +N  SPY+S KNH AYSC+C
Sbjct: 253 KRIGSGKTRILVPA----TSASASNFLSPYVSNKNHFAYSCYC 291


>Glyma15g00350.1 
          Length = 411

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 68/103 (66%), Positives = 80/103 (77%), Gaps = 7/103 (6%)

Query: 4   IMNLYLWKLLQESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAG 63
           + +L+     +E+IMP DKK KFL   DSEFEKVIDFY+ ++SDVFVPAISGLFYANV G
Sbjct: 316 LKDLFPKTYTKEAIMPADKKKKFL---DSEFEKVIDFYVSAESDVFVPAISGLFYANVVG 372

Query: 64  KRIASGKTQILVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           KRI SGKT+ILVPA    TSAS +N  SPY+S KNH AYSC+C
Sbjct: 373 KRIGSGKTRILVPA----TSASASNFLSPYVSNKNHFAYSCYC 411


>Glyma13g44980.1 
          Length = 407

 Score =  133 bits (334), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/103 (64%), Positives = 79/103 (76%), Gaps = 7/103 (6%)

Query: 4   IMNLYLWKLLQESIMPEDKKTKFLESEDSEFEKVIDFYLCSQSDVFVPAISGLFYANVAG 63
           + +L+     +E+IMP DKK +FL   DSEFEKVIDFY+ ++SDVFVPAISGLFYANV G
Sbjct: 312 LKDLFPKTYTKEAIMPADKKKRFL---DSEFEKVIDFYVSAESDVFVPAISGLFYANVVG 368

Query: 64  KRIASGKTQILVPANIPGTSASVTNHFSPYISKKNHLAYSCFC 106
           KRI SGKT+ILVPA     SAS +N  SPY+S KNH AYSC+C
Sbjct: 369 KRIGSGKTRILVPA----PSASASNFLSPYVSNKNHFAYSCYC 407