Jatropha Genome Database

JcCA0149151.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0149151.10 - phase: 2 /pseudo/partial
         (625 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g31480.1                                                       912   0.0  
Glyma13g24970.2                                                       453   e-127
Glyma13g24970.1                                                       453   e-127
Glyma15g07830.1                                                       346   5e-95

>Glyma13g31480.1 
          Length = 1165

 Score =  912 bits (2356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/574 (79%), Positives = 490/574 (85%), Gaps = 16/574 (2%)

Query: 61  EEDSMSPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPCS 120
           E +S++PATVFCIRLKQP+SNL +KMSVPE+CRNFSAV+WCGKLNAIACASETCARIP S
Sbjct: 22  EMESLTPATVFCIRLKQPKSNLLYKMSVPEICRNFSAVSWCGKLNAIACASETCARIPSS 81

Query: 121 NANPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITI 180
             NPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPT CPRALL+ANFHGR+TI
Sbjct: 82  TGNPPFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTCCPRALLVANFHGRVTI 141

Query: 181 WTQPSQGAANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXXFEE 240
           WTQPSQG ANL  DASCW REHEWRQDIAVVTKWLSGVS YRWL             FEE
Sbjct: 142 WTQPSQGQANLALDASCWLREHEWRQDIAVVTKWLSGVSLYRWLSSKPSGPANSRSTFEE 201

Query: 241 KFLSQQSQTS---------------GSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSG 285
           KFLSQQ QTS               GSVQLHWSQWPP QN   PKWF TSKG LG GPSG
Sbjct: 202 KFLSQQCQTSARWPNFLCVCSVLSSGSVQLHWSQWPP-QNATPPKWFCTSKGPLGCGPSG 260

Query: 286 IMAADAIVTDSGAMHVAGVPIVNPSTVVVWEVTPGPGPGFQAIAKTSTSNGVPPSLNPPT 345
           IMA DAI+TDSGAMHVAGVPIVNPST+VVWEV PGPG GFQ I +TST+NGVPP L+ P 
Sbjct: 261 IMAGDAIITDSGAMHVAGVPIVNPSTIVVWEVMPGPGNGFQVIPRTSTNNGVPPPLSSPN 320

Query: 346 WSGFAPLAAYLFSWQEYLISEAKHGKKQTDQDFSDAVSLHCSPVSNFSAYVSPEAAAQSA 405
           W+GFAPLAAYLFSWQ++L+SE K GK QT+Q+  D++ L+CSPVSNFSAYVSPE AAQ+A
Sbjct: 321 WTGFAPLAAYLFSWQDHLLSEEKQGKNQTNQNLGDSIPLNCSPVSNFSAYVSPETAAQTA 380

Query: 406 ATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQPVV 465
           ATTTWGSGVTAVAFDPT GGSVIAVVI EGQYMSPYDPDEGPSITGWRVQ WESSLQ VV
Sbjct: 381 ATTTWGSGVTAVAFDPTCGGSVIAVVIAEGQYMSPYDPDEGPSITGWRVQLWESSLQHVV 440

Query: 466 LHQIFGNPTSSFGGQAPMQTVWVSKVDTSIHPTNDFKNHQAVAAGPTSDVRKTSDSGVEK 525
           LH IFGNPTSS GGQ PMQTVW +KVD SI PTNDFKNHQA A G  +D++K S+ G +K
Sbjct: 441 LHPIFGNPTSSMGGQPPMQTVWQTKVDLSIPPTNDFKNHQAPAVGMNTDIQKVSEFGFDK 500

Query: 526 AKSLTFDPFDLPSDVRSLARIVYSAHGGEIAIAFLRGGVHIFSGPNFALVDSYQINVGSA 585
           +K + FDPFDLPSDVR+LARIVYS HGGEIAIAFLRGGVHIFSGPNFA VD+YQI+VGSA
Sbjct: 501 SKRVNFDPFDLPSDVRALARIVYSPHGGEIAIAFLRGGVHIFSGPNFAPVDNYQISVGSA 560

Query: 586 IAAPAFSSTSCCSASVWHDASKDRTILKIIRVLP 619
           IAAPAFSSTSCCSASVWHD SKD+TILKIIRVLP
Sbjct: 561 IAAPAFSSTSCCSASVWHDPSKDQTILKIIRVLP 594


>Glyma13g24970.2 
          Length = 1182

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/282 (78%), Positives = 231/282 (81%), Gaps = 21/282 (7%)

Query: 65  MSPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPCSNANP 124
           ++PATVF IRLKQPRSNL HKMSVPELCRNFSAV+WCGKLNAIACA+ET      S ANP
Sbjct: 68  VNPATVFSIRLKQPRSNLLHKMSVPELCRNFSAVSWCGKLNAIACAAET------STANP 121

Query: 125 PFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQP 184
           PFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSP+SCPRALLIANFHGR+TIWTQP
Sbjct: 122 PFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPSSCPRALLIANFHGRVTIWTQP 181

Query: 185 SQGAANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXXFEEKFLS 244
            QG ANLV D SCWQREHEWRQDIAVVTKWLSGVSPYRWL             FEEK+LS
Sbjct: 182 PQGPANLVHDTSCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPANSKLTFEEKYLS 241

Query: 245 QQSQT---------------SGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSGIMAA 289
           QQSQT               SGSVQLHWSQWPP+QN  TPKWF TSKGLLG GPSGIMA 
Sbjct: 242 QQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPTQNGTTPKWFCTSKGLLGCGPSGIMAG 301

Query: 290 DAIVTDSGAMHVAGVPIVNPSTVVVWEVTPGPGPGFQAIAKT 331
           DAI+TDSGAMHVAGVPIVNPST+VVWEV PGPG GFQ   KT
Sbjct: 302 DAIITDSGAMHVAGVPIVNPSTIVVWEVAPGPGNGFQVTPKT 343



 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/231 (85%), Positives = 212/231 (91%)

Query: 389 VSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPS 448
           +SNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTR GSVIAVVIVEGQYMSPYDPDEGPS
Sbjct: 344 ISNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRAGSVIAVVIVEGQYMSPYDPDEGPS 403

Query: 449 ITGWRVQRWESSLQPVVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIHPTNDFKNHQAVA 508
           ITGWRVQRWESSLQ VVLH IFGNPTSS GGQ PMQTVW SKVD SI PTNDFKNHQ+ A
Sbjct: 404 ITGWRVQRWESSLQHVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHQSPA 463

Query: 509 AGPTSDVRKTSDSGVEKAKSLTFDPFDLPSDVRSLARIVYSAHGGEIAIAFLRGGVHIFS 568
            G +SDV+K S+S  +K+K + FDPFDLPSDVR+LAR+VYSAHGGEIAIAFLRGGVH+FS
Sbjct: 464 IGMSSDVQKVSESVSDKSKRVNFDPFDLPSDVRALARVVYSAHGGEIAIAFLRGGVHVFS 523

Query: 569 GPNFALVDSYQINVGSAIAAPAFSSTSCCSASVWHDASKDRTILKIIRVLP 619
           GPNF  VD+YQINVGSAIAAPAFSSTSCCSASVWHD+SK+ TIL+IIRVLP
Sbjct: 524 GPNFTPVDNYQINVGSAIAAPAFSSTSCCSASVWHDSSKNCTILRIIRVLP 574


>Glyma13g24970.1 
          Length = 1182

 Score =  453 bits (1165), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 221/282 (78%), Positives = 231/282 (81%), Gaps = 21/282 (7%)

Query: 65  MSPATVFCIRLKQPRSNLQHKMSVPELCRNFSAVAWCGKLNAIACASETCARIPCSNANP 124
           ++PATVF IRLKQPRSNL HKMSVPELCRNFSAV+WCGKLNAIACA+ET      S ANP
Sbjct: 68  VNPATVFSIRLKQPRSNLLHKMSVPELCRNFSAVSWCGKLNAIACAAET------STANP 121

Query: 125 PFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPTSCPRALLIANFHGRITIWTQP 184
           PFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSP+SCPRALLIANFHGR+TIWTQP
Sbjct: 122 PFWIPIHIVIPERPTECAVFNVIADSPRDSVQFIEWSPSSCPRALLIANFHGRVTIWTQP 181

Query: 185 SQGAANLVRDASCWQREHEWRQDIAVVTKWLSGVSPYRWLXXXXXXXXXXXXXFEEKFLS 244
            QG ANLV D SCWQREHEWRQDIAVVTKWLSGVSPYRWL             FEEK+LS
Sbjct: 182 PQGPANLVHDTSCWQREHEWRQDIAVVTKWLSGVSPYRWLSSKSSAPANSKLTFEEKYLS 241

Query: 245 QQSQT---------------SGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSGIMAA 289
           QQSQT               SGSVQLHWSQWPP+QN  TPKWF TSKGLLG GPSGIMA 
Sbjct: 242 QQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPTQNGTTPKWFCTSKGLLGCGPSGIMAG 301

Query: 290 DAIVTDSGAMHVAGVPIVNPSTVVVWEVTPGPGPGFQAIAKT 331
           DAI+TDSGAMHVAGVPIVNPST+VVWEV PGPG GFQ   KT
Sbjct: 302 DAIITDSGAMHVAGVPIVNPSTIVVWEVAPGPGNGFQVTPKT 343



 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 197/231 (85%), Positives = 212/231 (91%)

Query: 389 VSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRGGSVIAVVIVEGQYMSPYDPDEGPS 448
           +SNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTR GSVIAVVIVEGQYMSPYDPDEGPS
Sbjct: 344 ISNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRAGSVIAVVIVEGQYMSPYDPDEGPS 403

Query: 449 ITGWRVQRWESSLQPVVLHQIFGNPTSSFGGQAPMQTVWVSKVDTSIHPTNDFKNHQAVA 508
           ITGWRVQRWESSLQ VVLH IFGNPTSS GGQ PMQTVW SKVD SI PTNDFKNHQ+ A
Sbjct: 404 ITGWRVQRWESSLQHVVLHPIFGNPTSSMGGQPPMQTVWQSKVDLSIPPTNDFKNHQSPA 463

Query: 509 AGPTSDVRKTSDSGVEKAKSLTFDPFDLPSDVRSLARIVYSAHGGEIAIAFLRGGVHIFS 568
            G +SDV+K S+S  +K+K + FDPFDLPSDVR+LAR+VYSAHGGEIAIAFLRGGVH+FS
Sbjct: 464 IGMSSDVQKVSESVSDKSKRVNFDPFDLPSDVRALARVVYSAHGGEIAIAFLRGGVHVFS 523

Query: 569 GPNFALVDSYQINVGSAIAAPAFSSTSCCSASVWHDASKDRTILKIIRVLP 619
           GPNF  VD+YQINVGSAIAAPAFSSTSCCSASVWHD+SK+ TIL+IIRVLP
Sbjct: 524 GPNFTPVDNYQINVGSAIAAPAFSSTSCCSASVWHDSSKNCTILRIIRVLP 574


>Glyma15g07830.1 
          Length = 555

 Score =  346 bits (887), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 212/373 (56%), Positives = 233/373 (62%), Gaps = 87/373 (23%)

Query: 249 TSGSVQLHWSQWPPSQNNATPKWFSTSKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVN 308
           +SGSVQLHWSQWPP QN  TPKWF TSKG LG GP GIMA DAI+TDSG M V GVPI  
Sbjct: 71  SSGSVQLHWSQWPP-QNATTPKWFCTSKGPLGCGPCGIMAGDAIITDSGTMLVTGVPI-- 127

Query: 309 PSTVVVWEVTPGPGPGFQAIAKTSTSNGVPPSLNPPTWSGFAPLAAYLFSWQEYLISEAK 368
                                           +NP T          +  W+        
Sbjct: 128 --------------------------------VNPST----------IVVWE-------- 137

Query: 369 HGKKQTDQDFSDAVSLHCSPVSNFSAYVSPEAAAQSAATTTWGSGVTAVAFDPTRGGSVI 428
                T+Q+  D++ L+CSPVSNFSAYVSPE AAQSAATTTWGSGVTAVAFDPT GGSVI
Sbjct: 138 -----TNQNLGDSIPLNCSPVSNFSAYVSPETAAQSAATTTWGSGVTAVAFDPTCGGSVI 192

Query: 429 AVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQPVVLHQIFGNPTSSFGGQAPMQTVWV 488
           AVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQ  VLH IFGNPTSS GGQ PMQTVW 
Sbjct: 193 AVVIVEGQYMSPYDPDEGPSITGWRVQRWESSLQHDVLHPIFGNPTSSMGGQPPMQTVWQ 252

Query: 489 SKVDTSIHPTNDFKNHQAVAAGPTSDVRKTSDSGVEKAKSLTFDPFDLPSDVRSLARIVY 548
           +KV+ SI PTNDFKNHQA A G  +D++K SD                          V 
Sbjct: 253 TKVELSIPPTNDFKNHQAPAVGMNTDMQKVSD-------------------------FVM 287

Query: 549 SAHGGEIAIAFLRGGV-HIFSGPNFALVDSYQINVGSAIAAPAFSSTSCCSASVWHDASK 607
             H  E     + G +  +F G       S+ I+VGSAIAAPAFSSTSCCSASVWHD SK
Sbjct: 288 LGHLQEFYNLLMVGKLPLLFFGEKST---SFLISVGSAIAAPAFSSTSCCSASVWHDTSK 344

Query: 608 DRTILKIIRVLPQ 620
           D+TILKIIRVLP 
Sbjct: 345 DQTILKIIRVLPH 357