Jatropha Genome Database

JcCA0148831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148831.10 + phase: 0 
         (288 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g07150.1                                                       241   5e-64
Glyma19g23570.1                                                       239   3e-63
Glyma10g26970.1                                                       133   2e-31
Glyma13g04300.1                                                       111   9e-25

>Glyma16g07150.1 
          Length = 279

 Score =  241 bits (616), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 130/252 (51%), Positives = 153/252 (60%), Gaps = 44/252 (17%)

Query: 65  QEHAQESIETYDTIKTNIKRLIKEFKIYRWNPDIPNRKPFLQSYYIDLSTCGPMVLDVLQ 124
           + HA E+       K      +K F+IYRWNP+ P+ KP L+ Y I+L  CGPMVLD L 
Sbjct: 25  RAHASEAQAQQVEPKARETPTLKTFQIYRWNPENPS-KPELKDYQINLKECGPMVLDALI 83

Query: 125 KIKAEDDSSLSYRRSCREGICGSCAMNIDGTNTVACLKPIDAD-TTKPTIITPLPHMFVI 183
           KIK E D SL++RRSCREGICGSCAMNIDG N +ACL  I ++  +  T ITPLPHMFVI
Sbjct: 84  KIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEKNSAATTITPLPHMFVI 143

Query: 184 KDLVVDLTNFYNQY-----------------------------------------SASCP 202
           KDLVVD+TNFYNQY                                         S SCP
Sbjct: 144 KDLVVDMTNFYNQYKSIEPWLKRKNPPVPGKEILQSKKEREKLDGMYECILCACCSTSCP 203

Query: 203 SYWWSPEEFLGPAPLLHAYRWISDSRDEFTEERLQALTEDTKKLYKCRTIKNCTACCPKS 262
           SYWW+PE +LGPA LLHA RWISDSRDE+T+ERL A+  D  KLY+C TI NC   CPK 
Sbjct: 204 SYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIN-DEFKLYRCHTILNCARACPKG 262

Query: 263 LNPADAIHKMKT 274
           LNP   I  +K+
Sbjct: 263 LNPGKQISHIKS 274


>Glyma19g23570.1 
          Length = 277

 Score =  239 bits (610), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/251 (51%), Positives = 152/251 (60%), Gaps = 44/251 (17%)

Query: 65  QEHAQESIETYDTIKTNIKRLIKEFKIYRWNPDIPNRKPFLQSYYIDLSTCGPMVLDVLQ 124
           + HA E+       K      +K F+IYRW+P+ P+ KP L+ Y I+L  CGPMVLD L 
Sbjct: 25  RAHASEAQAQQVEPKARGTPTLKTFQIYRWSPENPS-KPELKDYQINLKECGPMVLDALI 83

Query: 125 KIKAEDDSSLSYRRSCREGICGSCAMNIDGTNTVACLKPIDADTTKPTIITPLPHMFVIK 184
           KIK E D SL++RRSCREGICGSCAMNIDG N +ACL  I ++    T ITPLPHMFVIK
Sbjct: 84  KIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSEGAA-TTITPLPHMFVIK 142

Query: 185 DLVVDLTNFYNQY-----------------------------------------SASCPS 203
           DLVVD+TNFYNQY                                         S SCPS
Sbjct: 143 DLVVDMTNFYNQYKSIEPWLKRKNPPEPGKEILQSKKEREKLDGMYECILCACCSTSCPS 202

Query: 204 YWWSPEEFLGPAPLLHAYRWISDSRDEFTEERLQALTEDTKKLYKCRTIKNCTACCPKSL 263
           YWW+PE +LGPA LLHA RWISDSRDE+T+ERL A+  D  KLY+C TI NC   CPK L
Sbjct: 203 YWWNPESYLGPAALLHANRWISDSRDEYTKERLDAIN-DEFKLYRCHTILNCARACPKGL 261

Query: 264 NPADAIHKMKT 274
           NP   I  +K+
Sbjct: 262 NPGKQISHIKS 272


>Glyma10g26970.1 
          Length = 137

 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)

Query: 86  IKEFKIYRWNPDIPNRKPFLQSYYIDLSTCGPMVLDVLQKIKAEDDSSLSYRRSCREGIC 145
           +K F+IYRWNP  P++   ++ Y I+L   GPMVLD L  I+ + D SL++RRSCREGIC
Sbjct: 24  LKTFQIYRWNPKNPSKHK-VKDYQINLKEGGPMVLDALNNIQNKIDPSLTFRRSCREGIC 82

Query: 146 GSCAMNIDGTNTVACLK--PIDADTTKPTIITPLPHMFVIKDLVVDLTNFY 194
           GSCAMNID  N +ACL   P++ ++   T ITPLPHMFVIKDLV+D+TNFY
Sbjct: 83  GSCAMNIDDYNNIACLTKIPLEKNSAAMT-ITPLPHMFVIKDLVMDMTNFY 132


>Glyma13g04300.1 
          Length = 96

 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 55/97 (56%), Positives = 69/97 (71%), Gaps = 3/97 (3%)

Query: 106 QSYYIDLSTCGPMVLDVLQKIKAEDDSSLSYRRSCREGICGSCAMNIDGTNTVACLKPID 165
           + Y I+L  CGP VLD L  IK E D SL+++RSCREGI GSCAMNIDG N ++  K   
Sbjct: 3   KDYQINLKECGPTVLDALINIKNEIDPSLTFQRSCREGIYGSCAMNIDGCNDLSSPK--- 59

Query: 166 ADTTKPTIITPLPHMFVIKDLVVDLTNFYNQYSASCP 202
              +  T++TPLPH+FV KDLV+D+TNFYNQY +  P
Sbjct: 60  KKISATTMVTPLPHVFVFKDLVMDMTNFYNQYKSVEP 96