Jatropha Genome Database

JcCA0148631.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148631.20 - phase: 2 /partial
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09750.1                                                        63   6e-11
Glyma05g02180.2                                                        54   3e-08
Glyma05g02180.4                                                        54   3e-08
Glyma05g02180.1                                                        54   3e-08
Glyma05g02180.3                                                        54   3e-08

>Glyma17g09750.1 
          Length = 500

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 60/107 (56%)

Query: 1   EIENEDELKTGPYSARTNEQXXXXXXXXXXXXXXXXXXXXXXXRRPKPSVQKEQLADDQP 60
           EI+NE+E    PY++ +N+Q                       RRPKP+ QKEQ++D+Q 
Sbjct: 392 EIDNENESNGVPYASASNQQPVQRVWVPPQPPPIAMPEAAEAIRRPKPAAQKEQVSDNQS 451

Query: 61  VSHSTDATDELQRITKISESGGAVEINGGESEVNSSEIKEDQEHSYE 107
           V+HS D++D++    K+ ES GAVE +   S   SSEI+E+ E  Y+
Sbjct: 452 VAHSLDSSDDVHMAPKLLESEGAVEGSSVSSVPTSSEIQEEHEVKYD 498


>Glyma05g02180.2 
          Length = 512

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%)

Query: 44  RRPKPSVQKEQLADDQPVSHSTDATDELQRITKISESGGAVEINGGESEVNSSEIKEDQE 103
           RRPKP+ QKEQ++D+Q V+HS D +D++    K+ ES GAVE +   S   SSEI+E+ E
Sbjct: 447 RRPKPAAQKEQMSDNQSVAHSLDGSDDVHMDPKLLESEGAVEGSSVSSVPTSSEIQEEHE 506

Query: 104 HSYE 107
             Y+
Sbjct: 507 VKYD 510


>Glyma05g02180.4 
          Length = 501

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%)

Query: 44  RRPKPSVQKEQLADDQPVSHSTDATDELQRITKISESGGAVEINGGESEVNSSEIKEDQE 103
           RRPKP+ QKEQ++D+Q V+HS D +D++    K+ ES GAVE +   S   SSEI+E+ E
Sbjct: 436 RRPKPAAQKEQMSDNQSVAHSLDGSDDVHMDPKLLESEGAVEGSSVSSVPTSSEIQEEHE 495

Query: 104 HSYE 107
             Y+
Sbjct: 496 VKYD 499


>Glyma05g02180.1 
          Length = 514

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%)

Query: 44  RRPKPSVQKEQLADDQPVSHSTDATDELQRITKISESGGAVEINGGESEVNSSEIKEDQE 103
           RRPKP+ QKEQ++D+Q V+HS D +D++    K+ ES GAVE +   S   SSEI+E+ E
Sbjct: 449 RRPKPAAQKEQMSDNQSVAHSLDGSDDVHMDPKLLESEGAVEGSSVSSVPTSSEIQEEHE 508

Query: 104 HSYE 107
             Y+
Sbjct: 509 VKYD 512


>Glyma05g02180.3 
          Length = 500

 Score = 53.9 bits (128), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%)

Query: 44  RRPKPSVQKEQLADDQPVSHSTDATDELQRITKISESGGAVEINGGESEVNSSEIKEDQE 103
           RRPKP+ QKEQ++D+Q V+HS D +D++    K+ ES GAVE +   S   SSEI+E+ E
Sbjct: 435 RRPKPAAQKEQMSDNQSVAHSLDGSDDVHMDPKLLESEGAVEGSSVSSVPTSSEIQEEHE 494

Query: 104 HSYE 107
             Y+
Sbjct: 495 VKYD 498