Jatropha Genome Database

JcCA0148271.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0148271.30 + phase: 0 
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g23740.1                                                       132   1e-31
Glyma10g43150.1                                                       132   1e-31

>Glyma20g23740.1 
          Length = 572

 Score =  132 bits (332), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/88 (69%), Positives = 78/88 (88%), Gaps = 1/88 (1%)

Query: 47  LEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQ 106
           +EVV +GML  RKFMQ+RRK EVFKD+ADEADQKNWR +M +IEE+GSAV+VL +++I  
Sbjct: 36  MEVVCRGMLKPRKFMQRRRKFEVFKDSADEADQKNWRRIMTEIEESGSAVSVLSAEKIN- 94

Query: 107 NQDLPKDLVLGTLVRFQQLKKWNLVSEV 134
           NQ++PKDLV+GTL+RF+QLKKWNLV E+
Sbjct: 95  NQNIPKDLVVGTLIRFKQLKKWNLVVEI 122


>Glyma10g43150.1 
          Length = 553

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 61/90 (67%), Positives = 79/90 (87%), Gaps = 1/90 (1%)

Query: 47  LEVVAKGMLSQRKFMQKRRKVEVFKDAADEADQKNWRGVMKQIEETGSAVAVLKSKRITQ 106
           +EVV +GML  RKFMQ+RRK EVFKDAADEADQKNWR +M +IEE+GSAV+VL S++I  
Sbjct: 35  MEVVCRGMLKPRKFMQRRRKFEVFKDAADEADQKNWRRIMTEIEESGSAVSVLSSEKIN- 93

Query: 107 NQDLPKDLVLGTLVRFQQLKKWNLVSEVCN 136
           NQ++PKDL++GTL+RF+QLKKW+LV E+ +
Sbjct: 94  NQNIPKDLLVGTLIRFKQLKKWHLVVEILD 123