Jatropha Genome Database

JcCA0147671.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147671.20 + phase: 0 
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g29460.1                                                       300   7e-82
Glyma16g33870.1                                                       300   1e-81

>Glyma09g29460.1 
          Length = 324

 Score =  300 bits (769), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 154/205 (75%), Positives = 158/205 (77%), Gaps = 15/205 (7%)

Query: 1   MARQAVAKLLGXXXXXXXXXXXXXXXXXANHARQYXXXXXXXXXVFVDKNTRLICQGITG 60
           M RQAV KLL                  A+              VFVDK+TR+ICQGITG
Sbjct: 1   MGRQAVTKLL---------------SSIASRRHGLRLFSAASPAVFVDKSTRVICQGITG 45

Query: 61  KNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFX 120
           KNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPF 
Sbjct: 46  KNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFA 105

Query: 121 XXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECKIGI 180
                      LDLVVCITEGIPQHDMVRVKAALN+QSKTRLIGPNCPGIIKPGECKIGI
Sbjct: 106 AAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGI 165

Query: 181 MPGYIHKPGRIGIVSRSGTLTYEAV 205
           MPGYIHKPGRIGIVSRSGTLTYEAV
Sbjct: 166 MPGYIHKPGRIGIVSRSGTLTYEAV 190


>Glyma16g33870.1 
          Length = 325

 Score =  300 bits (767), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 154/205 (75%), Positives = 161/205 (78%), Gaps = 14/205 (6%)

Query: 1   MARQAVAKLLGXXXXXXXXXXXXXXXXXANHARQYXXXXXXXXXVFVDKNTRLICQGITG 60
           MARQA+ KLL                   +H  ++         VFVDK+TR+ICQGITG
Sbjct: 1   MARQALTKLLSSIASRR------------HHGLRHFSAASPA--VFVDKSTRVICQGITG 46

Query: 61  KNGTFHTEQAIEYGTKMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFX 120
           KNGTFHTEQAIEYGT MVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPF 
Sbjct: 47  KNGTFHTEQAIEYGTNMVGGVTPKKGGTEHLGLPVFNTVAEAKAETKANASVIYVPPPFA 106

Query: 121 XXXXXXXXXXXLDLVVCITEGIPQHDMVRVKAALNKQSKTRLIGPNCPGIIKPGECKIGI 180
                      LDLVVCITEGIPQHDMVRVKAALN+QSKTRLIGPNCPGIIKPGECKIGI
Sbjct: 107 AAAIMEAMEAELDLVVCITEGIPQHDMVRVKAALNRQSKTRLIGPNCPGIIKPGECKIGI 166

Query: 181 MPGYIHKPGRIGIVSRSGTLTYEAV 205
           MPGYIHKPGRIGIVSRSGTLTYEAV
Sbjct: 167 MPGYIHKPGRIGIVSRSGTLTYEAV 191