Jatropha Genome Database

JcCA0147671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147671.10 + phase: 2 /partial
         (75 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g29470.1                                                        82   2e-16
Glyma16g33880.1                                                        82   2e-16
Glyma16g08410.1                                                        54   3e-08
Glyma01g01270.1                                                        53   7e-08

>Glyma09g29470.1 
          Length = 729

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/37 (97%), Positives = 36/37 (97%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKP 37
           YDRARGVEIGNKDIKLEYLEEAFTT NWIVRIYKVKP
Sbjct: 688 YDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKP 724


>Glyma16g33880.1 
          Length = 508

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/37 (97%), Positives = 36/37 (97%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKP 37
           YDRARGVEIGNKDIKLEYLEEAFTT NWIVRIYKVKP
Sbjct: 467 YDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKP 503


>Glyma16g08410.1 
          Length = 778

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKP 37
           +DR R  EIG K  KL + EE FTT +W+VRIYK+KP
Sbjct: 710 FDRVRQTEIGKKHFKLTHFEEVFTTHHWMVRIYKLKP 746


>Glyma01g01270.1 
          Length = 778

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 22/37 (59%), Positives = 27/37 (72%)

Query: 1   YDRARGVEIGNKDIKLEYLEEAFTTSNWIVRIYKVKP 37
           +DR R  EIG K  KL + EE FTT +W+VRIYK+KP
Sbjct: 710 FDRVRRTEIGKKYFKLTHFEEVFTTHHWMVRIYKLKP 746