Jatropha Genome Database

JcCA0147561.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147561.20 - phase: 0 
         (203 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g18370.1                                                       319   1e-87
Glyma08g35470.1                                                       316   9e-87

>Glyma16g18370.1 
          Length = 206

 Score =  319 bits (817), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 155/199 (77%), Positives = 176/199 (88%), Gaps = 5/199 (2%)

Query: 1   MALNPQLFQNGLPVPFTNEIFVLSRDGVEFEIDKIP--GSHGGHVKAKGVIYLSNVRLVF 58
           MALNPQLF NG+PVPF NE+FVL+RDGVEFE+DKIP  G+HGGH+K KG++YLSN+R+VF
Sbjct: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGHLKTKGIVYLSNIRMVF 60

Query: 59  VAHKPVGAFTAFDMPLLYIHGEKFNQPIFFCNNISGLVEPVVPENENGALYSTHSFKILF 118
           VA   VG FTAFDMPLLYIHGEKFNQPIF CNN+SG VEPVVP +E+ ALYSTHSFKILF
Sbjct: 61  VAKSSVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDEHRALYSTHSFKILF 120

Query: 119 KEGGCGTFIPIFFNLISSVRQNNQPTPGMGPQ--MDPLRAAQTPVDEMMRHAYVDPNDPT 176
           KEGGCGTFIP+FFNLI+SVRQ NQ    M  Q  +DPL+A+QTPVDEMMRHAYVDPNDPT
Sbjct: 121 KEGGCGTFIPLFFNLITSVRQYNQHA-NMQTQTYVDPLQASQTPVDEMMRHAYVDPNDPT 179

Query: 177 RIFLQQPTPESELRRRTYQ 195
           +IFLQQPT +S+LRRRTYQ
Sbjct: 180 KIFLQQPTSDSQLRRRTYQ 198


>Glyma08g35470.1 
          Length = 206

 Score =  316 bits (810), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 154/199 (77%), Positives = 177/199 (88%), Gaps = 5/199 (2%)

Query: 1   MALNPQLFQNGLPVPFTNEIFVLSRDGVEFEIDKIP--GSHGGHVKAKGVIYLSNVRLVF 58
           MALNPQLF NG+PVPF NE+FVL+RDGVEFE+DKIP  G+HGG++K KG++YLSN+R+VF
Sbjct: 1   MALNPQLFPNGMPVPFVNEMFVLARDGVEFEVDKIPASGNHGGNLKTKGIVYLSNIRMVF 60

Query: 59  VAHKPVGAFTAFDMPLLYIHGEKFNQPIFFCNNISGLVEPVVPENENGALYSTHSFKILF 118
           VA  PVG FTAFDMPLLYIHGEKFNQPIF CNN+SG VEPVVP +++ ALYSTHSFKILF
Sbjct: 61  VAKSPVGHFTAFDMPLLYIHGEKFNQPIFHCNNLSGHVEPVVPNDQHRALYSTHSFKILF 120

Query: 119 KEGGCGTFIPIFFNLISSVRQNNQPTPGMGPQ--MDPLRAAQTPVDEMMRHAYVDPNDPT 176
           KEGGCGTFIP+FFNLI+SVRQ NQ T  M  Q  +DPL+A+QTPVDEMMRHAYVDPNDPT
Sbjct: 121 KEGGCGTFIPLFFNLITSVRQYNQHT-NMQTQNYVDPLQASQTPVDEMMRHAYVDPNDPT 179

Query: 177 RIFLQQPTPESELRRRTYQ 195
           +IFLQQP  +S+LRRRTYQ
Sbjct: 180 KIFLQQPNSDSQLRRRTYQ 198