Jatropha Genome Database

JcCA0147251.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147251.30 - phase: 0 /TE/partial
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g09090.1                                                       144   2e-35
Glyma05g26150.4                                                       144   2e-35
Glyma05g26150.3                                                       144   2e-35
Glyma05g26150.2                                                       144   2e-35
Glyma11g09700.1                                                        91   3e-19
Glyma12g03700.1                                                        90   4e-19
Glyma13g42660.1                                                        55   2e-08
Glyma13g42660.2                                                        55   2e-08
Glyma15g18450.1                                                        55   2e-08
Glyma09g07120.1                                                        55   2e-08

>Glyma08g09090.1 
          Length = 425

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 76/84 (90%), Gaps = 2/84 (2%)

Query: 1   LLTWSFFCRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 60
           L+ W    RIDEEQ+PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV+ASVAEDNILQ
Sbjct: 342 LMVWDL-SRIDEEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQ 400

Query: 61  IWQMEENIYHDEDDMPGDESTKGS 84
           IWQM ENIYHDEDD+P +ESTK +
Sbjct: 401 IWQMAENIYHDEDDLP-EESTKAA 423


>Glyma05g26150.4 
          Length = 425

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 76/84 (90%), Gaps = 2/84 (2%)

Query: 1   LLTWSFFCRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 60
           L+ W    RIDEEQ+PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV+ASVAEDNILQ
Sbjct: 342 LMVWDL-SRIDEEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQ 400

Query: 61  IWQMEENIYHDEDDMPGDESTKGS 84
           IWQM ENIYHDEDD+P +ESTK +
Sbjct: 401 IWQMAENIYHDEDDLP-EESTKAA 423


>Glyma05g26150.3 
          Length = 425

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 76/84 (90%), Gaps = 2/84 (2%)

Query: 1   LLTWSFFCRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 60
           L+ W    RIDEEQ+PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV+ASVAEDNILQ
Sbjct: 342 LMVWDL-SRIDEEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQ 400

Query: 61  IWQMEENIYHDEDDMPGDESTKGS 84
           IWQM ENIYHDEDD+P +ESTK +
Sbjct: 401 IWQMAENIYHDEDDLP-EESTKAA 423


>Glyma05g26150.2 
          Length = 425

 Score =  144 bits (363), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 70/84 (83%), Positives = 76/84 (90%), Gaps = 2/84 (2%)

Query: 1   LLTWSFFCRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 60
           L+ W    RIDEEQ+PEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWV+ASVAEDNILQ
Sbjct: 342 LMVWDL-SRIDEEQSPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVVASVAEDNILQ 400

Query: 61  IWQMEENIYHDEDDMPGDESTKGS 84
           IWQM ENIYHDEDD+P +ESTK +
Sbjct: 401 IWQMAENIYHDEDDLP-EESTKAA 423


>Glyma11g09700.1 
          Length = 403

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 1   LLTWSFFCRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 60
           L+ W    R+ +EQ   D E GPPELLF HGGH  KISDFSWN  + WVI SVAEDN   
Sbjct: 323 LMVWDL-NRVGDEQIEGDGEGGPPELLFSHGGHKGKISDFSWNRNQPWVITSVAEDNSFH 381

Query: 61  IWQMEENIYHDEDD 74
           +WQM E+IY+D DD
Sbjct: 382 VWQMAESIYNDGDD 395


>Glyma12g03700.1 
          Length = 401

 Score = 90.1 bits (222), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 1/74 (1%)

Query: 1   LLTWSFFCRIDEEQTPEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQ 60
           L+ W    R+  EQ   D E GPPELLF HGGH  KISDFSWN  + WVI+SVAEDN   
Sbjct: 321 LMVWDL-NRVGGEQIEGDGEGGPPELLFSHGGHKGKISDFSWNRNQPWVISSVAEDNSFH 379

Query: 61  IWQMEENIYHDEDD 74
           +WQM E+IY+D DD
Sbjct: 380 VWQMAESIYNDGDD 393


>Glyma13g42660.1 
          Length = 459

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 7/64 (10%)

Query: 19  AEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAED-------NILQIWQMEENIYHD 71
           A + PP L F H GH  K+ DF WN  + W I SV++D         LQIW+M + IY  
Sbjct: 380 ASNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDCESSGGGGTLQIWRMMDLIYRP 439

Query: 72  EDDM 75
           E+++
Sbjct: 440 EEEV 443


>Glyma13g42660.2 
          Length = 453

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 7/64 (10%)

Query: 19  AEDGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAED-------NILQIWQMEENIYHD 71
           A + PP L F H GH  K+ DF WN  + W I SV++D         LQIW+M + IY  
Sbjct: 374 ASNAPPGLFFRHAGHRDKVVDFHWNASDPWTIVSVSDDCESSGGGGTLQIWRMMDLIYRP 433

Query: 72  EDDM 75
           E+++
Sbjct: 434 EEEV 437


>Glyma15g18450.1 
          Length = 508

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 7/60 (11%)

Query: 23  PPELLFIHGGHTSKISDFSWNPCEDWVIASVAED-------NILQIWQMEENIYHDEDDM 75
           PP L F H GH  K+ DF WN  + W I SV++D         LQIW+M + IY  ED++
Sbjct: 429 PPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEV 488


>Glyma09g07120.1 
          Length = 513

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 7/60 (11%)

Query: 23  PPELLFIHGGHTSKISDFSWNPCEDWVIASVAED-------NILQIWQMEENIYHDEDDM 75
           PP L F H GH  K+ DF WN  + W I SV++D         LQIW+M + IY  ED++
Sbjct: 434 PPGLFFQHAGHRDKVVDFHWNAYDPWTIVSVSDDCESTGGGGTLQIWRMSDLIYRPEDEV 493