Jatropha Genome Database

JcCA0147251.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147251.20 + phase: 0 
         (178 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44430.1                                                       189   1e-48

>Glyma02g44430.1 
          Length = 139

 Score =  189 bits (480), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 86/108 (79%), Positives = 96/108 (88%)

Query: 44  NHSLPYLSLAKPSWVVKTESNVRKEIRKKPNPPCVVCKGSGRVDCHYCSGKGRTNLVHLP 103
           ++SLP+LS  KPSWVV+TESNVRK+ RKKP+P CVVC+GSGRVDCH C GKGRTN VHL 
Sbjct: 28  SNSLPHLSFTKPSWVVRTESNVRKKRRKKPDPHCVVCEGSGRVDCHQCHGKGRTNQVHLE 87

Query: 104 MLPKGEWPKWCRTCGGSGLSYCSRCLGTGEYRYIMGFHFMKMDSDDTQ 151
           MLPKGEWPKWCRTCGGSGLSYCSRCLGTGEYRYIMGF FM  D++ +Q
Sbjct: 88  MLPKGEWPKWCRTCGGSGLSYCSRCLGTGEYRYIMGFQFMNRDNNQSQ 135