Jatropha Genome Database

JcCA0147181.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147181.10 + phase: 0 
         (408 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g01980.1                                                        90   5e-18
Glyma07g08610.1                                                        78   2e-14
Glyma07g08600.1                                                        53   7e-07

>Glyma03g01980.1 
          Length = 482

 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 178/408 (43%), Gaps = 74/408 (18%)

Query: 15  KKRMLKDFLVDDLHTCSSTGFKSIPTKPADSSIQTVFQNDLSTGKLFRSRSTTMFAFHSV 74
           + RMLKDFL ++L++CSS+GF+S+P KP +++  ++  + L   +L  S S++   F ++
Sbjct: 15  RPRMLKDFLSENLNSCSSSGFESLPRKPTNNNNNSM--HSLIEMELKSSSSSSSSPFQTL 72

Query: 75  INALKNFQFTSVKAPSIFPXXXXXXXXXXXXXXXXDTERASESKLESEVKIT--VTIKDI 132
           IN +++    + K+PS+                     R   S++ S+V IT  V IKDI
Sbjct: 73  INTIRSISLFTPKSPSVLSLPRSLSRKLSSSRR---RTRRRRSRVCSDVNITTAVKIKDI 129

Query: 133 IRWKSFRDLMEEKSPPLDLAXXXXXXXXXXXXXXXXXXXXXNGSSWCDSDFTSEYLPFWN 192
           IRWKSFRD++ E S                           +GSSW  SDF         
Sbjct: 130 IRWKSFRDIVVEPS--PLPPPPPPLDFMVGSTNTTTCSSCSSGSSWIKSDFL-------- 179

Query: 193 GNSEEYGENEAMEVGKKDLPCVGEATIEAEKIVGPK---------AEEKQLSSPISVIDI 243
             + E  +N+ +E   K    +         +VG K          +E+Q  SP+SV+ +
Sbjct: 180 --TLEEAQNDNVEAAGKRFSFISHL------LVGSKNSWAKETLTCQEEQ-HSPVSVLQV 230

Query: 244 EFEGDEDSSSIYDESNANVE----------------SKYPF-NLEKWMAVXXXXXXXXXX 286
                ED  S +D+S AN++                +K+   NL++ +++          
Sbjct: 231 ----GEDEFSPFDQSLANIQRRKQKFIQTVQKLESLAKFDLANLDQCLSLDDNSGYDEEY 286

Query: 287 XXXXXXXXX---------XXAWQLLNYFKQTSSMKEER-----LVFDFFREELCRKTYET 332
                               A QLLN  K   S    R     L+ DFFREEL     + 
Sbjct: 287 EEDDADNEVDIEEQDWIEEKAKQLLNCVKARGSADGCRDYLDTLLLDFFREELSGGRNQY 346

Query: 333 KN-EGFECEMLISRVKE-WINGEDRMWVGGENKEACIREMERQGKWSK 378
           KN E FE E L  R+ E WING      G  +K A I++MER+ +WS+
Sbjct: 347 KNEEEFELETL--RITEDWINGSFAFDAGHVDKHAYIKDMERRDQWSR 392


>Glyma07g08610.1 
          Length = 472

 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 77/143 (53%), Gaps = 16/143 (11%)

Query: 15  KKRMLKDFLVDDLHTCSSTGFKSIPTKPA-DSSIQTVFQNDLSTGKLFRSRSTTMFAFHS 73
           + RMLKDFL ++L++CSS+GFKS+P KP  ++S+ ++ + +L +             F +
Sbjct: 14  RPRMLKDFLSENLNSCSSSGFKSLPRKPTNNNSMHSLIEMELKSSS----------PFQT 63

Query: 74  VINALKNFQFTSVKAPSIFPXXXXXXXXXXXXXXXXDTERASESKLESEVKIT--VTIKD 131
           ++N +++    + K+PS+                   T R       S+V IT  V IKD
Sbjct: 64  LMNTIRSISLFTSKSPSVLSLPRSLSRKLSSSRRKTRTRRRRSHVCSSDVNITTVVKIKD 123

Query: 132 IIRWKSFRDLMEEKS---PPLDL 151
           IIRWKSFRD++ E S   PPLD 
Sbjct: 124 IIRWKSFRDIVVEPSLPPPPLDF 146



 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 316 LVFDFFREELCRKTYETKNEG-FECEMLISRVKE-WINGEDRMWVGGENKEACIREMERQ 373
           L+ DFFREEL     + KNE  FE E L  R+ E WING      G  +K A I++MER+
Sbjct: 298 LLLDFFREELSGSRNQYKNEEEFELETL--RITEDWINGSFAFDAGHADKHAYIKDMERR 355

Query: 374 GKWSK 378
            +WS+
Sbjct: 356 DQWSR 360


>Glyma07g08600.1 
          Length = 282

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 40/65 (61%), Gaps = 4/65 (6%)

Query: 316 LVFDFFREELCRKTYETKNE-GFECEMLISRVKE-WINGEDRMWVGGENKEACIREMERQ 373
           L+ DFFREEL     + KNE GFE E L  R+ E WING      G  +K A I++MER+
Sbjct: 191 LLLDFFREELSGSRNQYKNEEGFELETL--RITEDWINGSFAFDAGHAHKHAYIKDMERR 248

Query: 374 GKWSK 378
            +WS+
Sbjct: 249 DQWSR 253