Jatropha Genome Database

JcCA0147111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147111.10 - phase: 0 /partial
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g03260.1                                                       261   2e-70
Glyma20g23680.2                                                       261   5e-70
Glyma20g23680.1                                                       260   5e-70
Glyma18g03270.1                                                       249   1e-66
Glyma10g43210.1                                                        65   4e-11

>Glyma18g03260.1 
          Length = 510

 Score =  261 bits (668), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 117/157 (74%), Positives = 138/157 (87%)

Query: 46  VDDEAKFVEAAKHGNIVPLRSCIFSDQLTPVTAYRCLVKEDDREAPSFLFETVEPGFQVS 105
           V++ AKFVEA+K+GN++PL  CIFSDQLTP+ AYR LVKEDDRE+PSFLFE+ EP +  S
Sbjct: 1   VEEGAKFVEASKNGNLIPLCQCIFSDQLTPILAYRILVKEDDRESPSFLFESAEPSYHAS 60

Query: 106 RVGRYSVVGAQPAIEIVAKENKVTIIDHEAGCLTEEFVEDPMTIPRRISESWKPQIISEL 165
            VGRYSVVGAQP +E+VAKENKVTIIDHE+G LTE+ V+DPM IPR++SE WKP +I+EL
Sbjct: 61  SVGRYSVVGAQPTMEVVAKENKVTIIDHESGNLTEKIVDDPMMIPRKVSEGWKPYLINEL 120

Query: 166 SEAFCGGWVGYFSYDTVRYVEKKKLPFSGAPDDDRNL 202
            +AFCGGW GYFSYDTVRYVEKKKLPFS AP+DDRNL
Sbjct: 121 PDAFCGGWAGYFSYDTVRYVEKKKLPFSNAPEDDRNL 157


>Glyma20g23680.2 
          Length = 438

 Score =  261 bits (666), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 143/170 (84%), Gaps = 2/170 (1%)

Query: 34  SLKCISHS-NPSLVDDEAKFVEAAKHGNIVPLRSCIFSDQLTPVTAYRCLVKEDDREAPS 92
           +LKC + S +PSLVD+  KF+EA+K GN++PL  CIFSD LTPV AYRCLVKED+R+APS
Sbjct: 26  TLKCCAQSPSPSLVDNAQKFLEASKKGNVIPLFRCIFSDHLTPVLAYRCLVKEDERDAPS 85

Query: 93  FLFETVEPGFQVSRVGRYSVVGAQPAIEIVAKENKVTIIDHEAGCLTEEFVEDPMTIPRR 152
           FLFE+VEPG Q+S +GRYSVVGAQP +EIVAKEN VTI+DH  G  +EE VEDP+ IPRR
Sbjct: 86  FLFESVEPG-QISSIGRYSVVGAQPCMEIVAKENVVTIMDHVEGRRSEEIVEDPLVIPRR 144

Query: 153 ISESWKPQIISELSEAFCGGWVGYFSYDTVRYVEKKKLPFSGAPDDDRNL 202
           I E W PQ++ EL EAFCGGWVGYFSYDT+RYVEKKKLPFS AP DDRNL
Sbjct: 145 IMEKWTPQLLDELPEAFCGGWVGYFSYDTMRYVEKKKLPFSNAPVDDRNL 194


>Glyma20g23680.1 
          Length = 567

 Score =  260 bits (665), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 123/170 (72%), Positives = 143/170 (84%), Gaps = 2/170 (1%)

Query: 34  SLKCISHS-NPSLVDDEAKFVEAAKHGNIVPLRSCIFSDQLTPVTAYRCLVKEDDREAPS 92
           +LKC + S +PSLVD+  KF+EA+K GN++PL  CIFSD LTPV AYRCLVKED+R+APS
Sbjct: 26  TLKCCAQSPSPSLVDNAQKFLEASKKGNVIPLFRCIFSDHLTPVLAYRCLVKEDERDAPS 85

Query: 93  FLFETVEPGFQVSRVGRYSVVGAQPAIEIVAKENKVTIIDHEAGCLTEEFVEDPMTIPRR 152
           FLFE+VEPG Q+S +GRYSVVGAQP +EIVAKEN VTI+DH  G  +EE VEDP+ IPRR
Sbjct: 86  FLFESVEPG-QISSIGRYSVVGAQPCMEIVAKENVVTIMDHVEGRRSEEIVEDPLVIPRR 144

Query: 153 ISESWKPQIISELSEAFCGGWVGYFSYDTVRYVEKKKLPFSGAPDDDRNL 202
           I E W PQ++ EL EAFCGGWVGYFSYDT+RYVEKKKLPFS AP DDRNL
Sbjct: 145 IMEKWTPQLLDELPEAFCGGWVGYFSYDTMRYVEKKKLPFSNAPVDDRNL 194


>Glyma18g03270.1 
          Length = 530

 Score =  249 bits (636), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 114/157 (72%), Positives = 132/157 (84%)

Query: 46  VDDEAKFVEAAKHGNIVPLRSCIFSDQLTPVTAYRCLVKEDDREAPSFLFETVEPGFQVS 105
           V++  KFVEA+K+GN++PL   IF+DQLTPV AYR LVKEDD EAPSFL E+ EP +  S
Sbjct: 1   VEEGRKFVEASKNGNLIPLCQSIFADQLTPVLAYRILVKEDDWEAPSFLLESAEPSYHAS 60

Query: 106 RVGRYSVVGAQPAIEIVAKENKVTIIDHEAGCLTEEFVEDPMTIPRRISESWKPQIISEL 165
            VGRYSV+GA P +E+VAKENKVTIIDHE+G LTEE V+DPM IPR+ISE WKP +I EL
Sbjct: 61  SVGRYSVLGANPTMEVVAKENKVTIIDHESGNLTEEIVDDPMVIPRKISEGWKPYLIDEL 120

Query: 166 SEAFCGGWVGYFSYDTVRYVEKKKLPFSGAPDDDRNL 202
            +AFCGGW GYFSYDTVRYVEKKKLPFS AP+DDRNL
Sbjct: 121 PDAFCGGWAGYFSYDTVRYVEKKKLPFSNAPEDDRNL 157


>Glyma10g43210.1 
          Length = 382

 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 27/30 (90%), Positives = 28/30 (93%)

Query: 172 GWVGYFSYDTVRYVEKKKLPFSGAPDDDRN 201
           GWVGYFSYDT+RYVEKKKLPFS AP DDRN
Sbjct: 1   GWVGYFSYDTMRYVEKKKLPFSNAPADDRN 30