Jatropha Genome Database

JcCA0147051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147051.10 + phase: 1 /partial
         (133 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g15340.1                                                       134   3e-32
Glyma07g33110.1                                                        98   3e-21

>Glyma02g15340.1 
          Length = 2749

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 72/134 (53%), Positives = 96/134 (71%), Gaps = 1/134 (0%)

Query: 1    LAHYRSSIGKSPYIDFDGEQQLMNKLKETEDDRVQIAQRLFGLCTSVLKVAGITKPVSNV 60
            LA  R+S G    I+ D EQ+LM KLKE E+++VQ+AQ+L  L T+VLKVAGI +P S+V
Sbjct: 2616 LARLRASTGAKKSINLDEEQRLMIKLKEIEEEKVQLAQQLLRLSTNVLKVAGIARPTSDV 2675

Query: 61   TPAAAEEALEQMKSKLTSLERECQDLTIKNRITTEKNRLLEVMAQASPVNSRIDENCQTP 120
             P+ AEEAL+ +K+++T+LE E +DL  KN+I  EK RL E+M QASP+N R +EN  TP
Sbjct: 2676 NPSMAEEALQDLKNRITTLEMEQEDLKFKNKIIKEKIRLSELMPQASPLNPRSEENRLTP 2735

Query: 121  KR-SQTSFLSALDR 133
             R S   FLS+ DR
Sbjct: 2736 PRVSLAPFLSSFDR 2749


>Glyma07g33110.1 
          Length = 1773

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 68/89 (76%)

Query: 1    LAHYRSSIGKSPYIDFDGEQQLMNKLKETEDDRVQIAQRLFGLCTSVLKVAGITKPVSNV 60
            LA  R+S G    I+FD EQ+LM KLKE E+++VQ+AQ+L  L T+VLKVAGI +P+S+V
Sbjct: 1685 LARLRASAGVKTSINFDEEQRLMIKLKEIEEEKVQLAQQLLRLSTNVLKVAGIVRPISDV 1744

Query: 61   TPAAAEEALEQMKSKLTSLERECQDLTIK 89
             P+ AEEAL+ +K+++T+LE E +DL  K
Sbjct: 1745 NPSMAEEALQDLKNRITTLEMEQEDLKFK 1773