Jatropha Genome Database

JcCA0147021.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0147021.20 + phase: 0 
         (169 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g07440.1                                                       136   1e-32
Glyma08g45230.1                                                       133   9e-32
Glyma13g04820.1                                                        88   5e-18
Glyma06g41390.1                                                        86   2e-17

>Glyma18g07440.1 
          Length = 248

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/138 (52%), Positives = 92/138 (66%), Gaps = 11/138 (7%)

Query: 30  KRKLRSNAMAVQDSPISSPVKWKSPRRSLPSGPNTPRNEIENACKSVTKELSNDITNKSS 89
           KR LRS+         SSP + KSPRR   + PN+     +N      +  ++    K  
Sbjct: 7   KRTLRSHP--------SSPPR-KSPRRCTAATPNS--TPTKNRLGGADENQADPAAVKPK 55

Query: 90  WNPRDMEQISAVKEALHVSTAPSTVVCREDEQKRVFEFCKTCIEQEKAGSLYVCGCPGTG 149
           WNP+D EQ+   K ALH+STAPS+VVCRE+EQ  V EFCK C+E +KAGSLY+CGCPGTG
Sbjct: 56  WNPKDGEQLKRAKMALHLSTAPSSVVCREEEQNMVLEFCKGCVEHQKAGSLYICGCPGTG 115

Query: 150 KSLSMEKVKQQLIDWSKE 167
           KSLSMEKVK +L++W+KE
Sbjct: 116 KSLSMEKVKDKLLNWAKE 133


>Glyma08g45230.1 
          Length = 476

 Score =  133 bits (334), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 75/139 (53%), Positives = 92/139 (66%), Gaps = 14/139 (10%)

Query: 30  KRKLRSNAMAVQDSPISSPVKWKSPRRSLPSGPN-TPRNEIENACKSVTKELSNDITNKS 88
           KR LRS+       P S P   KSPRR   + PN TP      A     +  ++    K 
Sbjct: 7   KRTLRSH-------PSSPP--RKSPRRCTAATPNSTPTMNRFGA----DENRADPEAVKP 53

Query: 89  SWNPRDMEQISAVKEALHVSTAPSTVVCREDEQKRVFEFCKTCIEQEKAGSLYVCGCPGT 148
            WNP+D EQ+  VK ALH+STAPS+VVCRE+EQ  V EFCK C+E +KAGSLY+CGCPGT
Sbjct: 54  KWNPKDGEQLKRVKLALHLSTAPSSVVCREEEQNVVLEFCKGCVEHQKAGSLYICGCPGT 113

Query: 149 GKSLSMEKVKQQLIDWSKE 167
           GKSLSMEKVK +L++W+KE
Sbjct: 114 GKSLSMEKVKDKLLNWAKE 132


>Glyma13g04820.1 
          Length = 64

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 42/64 (65%), Positives = 51/64 (79%), Gaps = 1/64 (1%)

Query: 104 ALHVSTAPSTVVCREDEQKRVFEFCKTCIEQEKAGSLYVCGCPGTGKSLSMEKVKQQLID 163
           ALH+STA S  VCRE+E+  V EFCK CIE +KAG+LY+   P TGKSLSMEKVK +L+D
Sbjct: 2   ALHLSTALS-FVCREEEKNMVLEFCKGCIEHQKAGNLYIYRFPETGKSLSMEKVKDKLLD 60

Query: 164 WSKE 167
           W+KE
Sbjct: 61  WAKE 64


>Glyma06g41390.1 
          Length = 107

 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 3/76 (3%)

Query: 94  DMEQISAVKEALHVSTAPSTVVCREDEQKRVFEFCKTCIEQEKAGSLYVCGCPGTGKSLS 153
           D EQ+   K ALH+STA + VVCR    +  F  CK C+E +KA SLY+CGCP  GKSLS
Sbjct: 1   DGEQLKRTKMALHLSTALTLVVCRA-RSRIWFWNCKGCVEHKKAESLYICGCP--GKSLS 57

Query: 154 MEKVKQQLIDWSKEVH 169
           MEKVK +L++W+KE+H
Sbjct: 58  MEKVKDKLLNWAKELH 73