Jatropha Genome Database

JcCA0146871.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146871.10 + phase: 0 
         (156 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38010.2                                                       224   2e-59
Glyma09g38010.1                                                       224   2e-59
Glyma18g48370.1                                                       215   1e-56

>Glyma09g38010.2 
          Length = 291

 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 104/122 (85%), Positives = 115/122 (94%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEWMREA+CP+VAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 170 MFGYNDLIVDPRNLEWMREANCPIVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 229

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL APVDGPTQWPLRH + LLEEL+AIAR SKGK+R +IDLTPF
Sbjct: 230 AVAVGVDGIFMEVHDDPLKAPVDGPTQWPLRHFKELLEELVAIARISKGKQRFNIDLTPF 289

Query: 155 RD 156
           R+
Sbjct: 290 RE 291


>Glyma09g38010.1 
          Length = 291

 Score =  224 bits (572), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 104/122 (85%), Positives = 115/122 (94%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F  +DLIVDPRNLEWMREA+CP+VAD+THSLQQPAG+KLDGGGVASGGLRELIPCIART
Sbjct: 170 MFGYNDLIVDPRNLEWMREANCPIVADITHSLQQPAGKKLDGGGVASGGLRELIPCIART 229

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL APVDGPTQWPLRH + LLEEL+AIAR SKGK+R +IDLTPF
Sbjct: 230 AVAVGVDGIFMEVHDDPLKAPVDGPTQWPLRHFKELLEELVAIARISKGKQRFNIDLTPF 289

Query: 155 RD 156
           R+
Sbjct: 290 RE 291


>Glyma18g48370.1 
          Length = 291

 Score =  215 bits (548), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 100/122 (81%), Positives = 111/122 (90%)

Query: 35  LFCADDLIVDPRNLEWMREADCPVVADVTHSLQQPAGRKLDGGGVASGGLRELIPCIART 94
           +F   DLIVDPRNLEWMREA+CP+VAD+THSLQQPAG+ +DGGGVASGGLRELIPCIART
Sbjct: 170 MFGYSDLIVDPRNLEWMREANCPIVADITHSLQQPAGKMVDGGGVASGGLRELIPCIART 229

Query: 95  AVAVGVDGIFMEVHDDPLTAPVDGPTQWPLRHLEGLLEELMAIARASKGKRRMDIDLTPF 154
           AVAVGVDGIFMEVHDDPL APVDGPTQW LRH + LLEEL+AIA  SKGK+R +IDLTPF
Sbjct: 230 AVAVGVDGIFMEVHDDPLNAPVDGPTQWALRHFKELLEELVAIAGVSKGKQRFNIDLTPF 289

Query: 155 RD 156
           R+
Sbjct: 290 RE 291