Jatropha Genome Database

JcCA0146681.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0146681.10 + phase: 0 
         (248 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g36580.1                                                       339   2e-93
Glyma03g33830.1                                                       337   9e-93
Glyma03g33830.2                                                       336   1e-92
Glyma13g20390.1                                                       325   3e-89
Glyma10g06090.1                                                       249   1e-66
Glyma10g06090.2                                                       249   2e-66

>Glyma19g36580.1 
          Length = 488

 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 170/230 (73%), Positives = 192/230 (83%), Gaps = 7/230 (3%)

Query: 1   MAATTTSTHLYRPPSLSKTRTYPLNQNPF-LKIPILPLKFTRTSSKPFSLKAVLSQNQAN 59
           MA +   +H    PSL KT ++ LNQN    K+  LPLKF + ++KP +L+AVLSQN   
Sbjct: 1   MAGSNILSH---SPSLPKTYSHSLNQNALSQKLFFLPLKF-KATTKPRALRAVLSQNAVK 56

Query: 60  TFTQ--KTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYRDA 117
           T  +  K   F+HCFTK  DG+LYCE LKV DIME+VE+RPFYLYSKPQITRNVEAY+DA
Sbjct: 57  TSVEDTKNAHFQHCFTKSEDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYKDA 116

Query: 118 LEGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNGKL 177
           LEGLNSIIGYAIKANNNLK+LEHLR LGCGAVLVSGNEL+LALRAGFDP RCIFNGNGK+
Sbjct: 117 LEGLNSIIGYAIKANNNLKILEHLRHLGCGAVLVSGNELKLALRAGFDPTRCIFNGNGKI 176

Query: 178 LEDLVLAAQEGVFVNVDSEFDLENIVAAARIAGEKVNVLLRINPDVDPQV 227
           LEDLVLAAQEGVFVN+DSEFDLENIV AA+ AG+KVNVLLRINPDVDPQV
Sbjct: 177 LEDLVLAAQEGVFVNIDSEFDLENIVEAAKRAGKKVNVLLRINPDVDPQV 226


>Glyma03g33830.1 
          Length = 488

 Score =  337 bits (863), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 172/232 (74%), Positives = 191/232 (82%), Gaps = 11/232 (4%)

Query: 1   MAATTTSTHLYRPPSLSKTRTYPLNQNPF---LKIPILPLKFTRTSSKPFSLKAVLSQNQ 57
           MA +   +H    PSL KT  Y LNQNP    L  P  PLKF ++++KP  L+AVLSQN 
Sbjct: 1   MAGSHLLSH---SPSLPKTYNYSLNQNPLSQNLFFP--PLKF-KSTTKPRVLRAVLSQNA 54

Query: 58  ANTFTQ--KTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYR 115
           A T  +  K   F+HCFTK  DG+LYCE LKV DIME+VE+RPFYLYSKPQITRNVEAY+
Sbjct: 55  AKTAVEDTKNAHFQHCFTKSEDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYK 114

Query: 116 DALEGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNG 175
           DALEGL+SIIGYAIKANNNLK+LEHLR LGCGAVLVSGNELRLALRAGFDP RCIFNGNG
Sbjct: 115 DALEGLSSIIGYAIKANNNLKILEHLRHLGCGAVLVSGNELRLALRAGFDPTRCIFNGNG 174

Query: 176 KLLEDLVLAAQEGVFVNVDSEFDLENIVAAARIAGEKVNVLLRINPDVDPQV 227
           K+LEDLVLAAQEGVFVN+DSEFDLENI  AA+ AG+KVNVLLRINPDVDPQV
Sbjct: 175 KILEDLVLAAQEGVFVNIDSEFDLENITEAAKRAGKKVNVLLRINPDVDPQV 226


>Glyma03g33830.2 
          Length = 463

 Score =  336 bits (862), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 172/232 (74%), Positives = 191/232 (82%), Gaps = 11/232 (4%)

Query: 1   MAATTTSTHLYRPPSLSKTRTYPLNQNPF---LKIPILPLKFTRTSSKPFSLKAVLSQNQ 57
           MA +   +H    PSL KT  Y LNQNP    L  P  PLKF ++++KP  L+AVLSQN 
Sbjct: 1   MAGSHLLSH---SPSLPKTYNYSLNQNPLSQNLFFP--PLKF-KSTTKPRVLRAVLSQNA 54

Query: 58  ANTFTQ--KTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYR 115
           A T  +  K   F+HCFTK  DG+LYCE LKV DIME+VE+RPFYLYSKPQITRNVEAY+
Sbjct: 55  AKTAVEDTKNAHFQHCFTKSEDGYLYCEGLKVHDIMESVERRPFYLYSKPQITRNVEAYK 114

Query: 116 DALEGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNG 175
           DALEGL+SIIGYAIKANNNLK+LEHLR LGCGAVLVSGNELRLALRAGFDP RCIFNGNG
Sbjct: 115 DALEGLSSIIGYAIKANNNLKILEHLRHLGCGAVLVSGNELRLALRAGFDPTRCIFNGNG 174

Query: 176 KLLEDLVLAAQEGVFVNVDSEFDLENIVAAARIAGEKVNVLLRINPDVDPQV 227
           K+LEDLVLAAQEGVFVN+DSEFDLENI  AA+ AG+KVNVLLRINPDVDPQV
Sbjct: 175 KILEDLVLAAQEGVFVNIDSEFDLENITEAAKRAGKKVNVLLRINPDVDPQV 226


>Glyma13g20390.1 
          Length = 488

 Score =  325 bits (833), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 169/232 (72%), Positives = 190/232 (81%), Gaps = 11/232 (4%)

Query: 1   MAATTTSTHLYRPPSLSKT-RTYPLNQNPFLKIPILPLKFTRTSSKPFSLKAVLSQ---- 55
           MAA+     LY PP LSKT   +PLNQNP  +  ILPLK T    KP  L+AV SQ    
Sbjct: 1   MAASHI---LYNPPPLSKTFINHPLNQNPSPQNLILPLKAT---IKPRVLRAVHSQKITA 54

Query: 56  NQANTFTQKTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYR 115
           N +   +   T F+HCFTK  DG LYCE LKV +IM++VE+RPFYLYSKPQITRNVEAY+
Sbjct: 55  NSSLHNSDTRTRFQHCFTKSEDGLLYCEGLKVHEIMDSVERRPFYLYSKPQITRNVEAYK 114

Query: 116 DALEGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNG 175
           DALEGL SIIGYAIKANNNLK+LEHLRQLGCGAVLVSGNELRLALRAGFDP RCIFNGNG
Sbjct: 115 DALEGLRSIIGYAIKANNNLKILEHLRQLGCGAVLVSGNELRLALRAGFDPTRCIFNGNG 174

Query: 176 KLLEDLVLAAQEGVFVNVDSEFDLENIVAAARIAGEKVNVLLRINPDVDPQV 227
           K+L+DLVLAA+EGVFVN+DSEFDLENI+AAA+IA ++VNVLLRINPDVDPQV
Sbjct: 175 KVLDDLVLAAKEGVFVNIDSEFDLENIIAAAKIAQKRVNVLLRINPDVDPQV 226


>Glyma10g06090.1 
          Length = 411

 Score =  249 bits (637), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/208 (65%), Positives = 155/208 (74%), Gaps = 16/208 (7%)

Query: 1   MAATTTSTHLYRPPSLSKTR-TYPLNQNPFLKIPILPLKFTRTSSKPFSLKAVLSQ---- 55
           MAA+     LY PPSLSKT   + LNQNPF +  ILPLK T    KP  L+ V SQ    
Sbjct: 1   MAASHV---LYNPPSLSKTFINHSLNQNPFPQNLILPLKAT---IKPRVLRVVHSQKIIA 54

Query: 56  NQANTFTQKTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYR 115
           N +   +   T F+H FTK  DGFLYCE LKV +IM++VE+  FYL SKP+ITRNVEAY+
Sbjct: 55  NPSLHDSDTKTHFRHYFTKSEDGFLYCEGLKVHEIMDSVERTHFYLSSKPEITRNVEAYK 114

Query: 116 DALEGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNG 175
           DALE L SIIGYAIKA     +LEHLRQLGCGAVLVSGNE  LAL AGFDP RCIFNGNG
Sbjct: 115 DALECLRSIIGYAIKA-----ILEHLRQLGCGAVLVSGNEFSLALHAGFDPTRCIFNGNG 169

Query: 176 KLLEDLVLAAQEGVFVNVDSEFDLENIV 203
           K+L+DLVLAA+EGVFVN+DSEFDLENIV
Sbjct: 170 KILDDLVLAAKEGVFVNIDSEFDLENIV 197


>Glyma10g06090.2 
          Length = 343

 Score =  249 bits (636), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/208 (65%), Positives = 155/208 (74%), Gaps = 16/208 (7%)

Query: 1   MAATTTSTHLYRPPSLSKTR-TYPLNQNPFLKIPILPLKFTRTSSKPFSLKAVLSQ---- 55
           MAA+     LY PPSLSKT   + LNQNPF +  ILPLK T    KP  L+ V SQ    
Sbjct: 1   MAASHV---LYNPPSLSKTFINHSLNQNPFPQNLILPLKAT---IKPRVLRVVHSQKIIA 54

Query: 56  NQANTFTQKTTPFKHCFTKPSDGFLYCENLKVQDIMENVEKRPFYLYSKPQITRNVEAYR 115
           N +   +   T F+H FTK  DGFLYCE LKV +IM++VE+  FYL SKP+ITRNVEAY+
Sbjct: 55  NPSLHDSDTKTHFRHYFTKSEDGFLYCEGLKVHEIMDSVERTHFYLSSKPEITRNVEAYK 114

Query: 116 DALEGLNSIIGYAIKANNNLKVLEHLRQLGCGAVLVSGNELRLALRAGFDPKRCIFNGNG 175
           DALE L SIIGYAIKA     +LEHLRQLGCGAVLVSGNE  LAL AGFDP RCIFNGNG
Sbjct: 115 DALECLRSIIGYAIKA-----ILEHLRQLGCGAVLVSGNEFSLALHAGFDPTRCIFNGNG 169

Query: 176 KLLEDLVLAAQEGVFVNVDSEFDLENIV 203
           K+L+DLVLAA+EGVFVN+DSEFDLENIV
Sbjct: 170 KILDDLVLAAKEGVFVNIDSEFDLENIV 197