Jatropha Genome Database

JcCA0145571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0145571.10 - phase: 0 /partial
         (350 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g10750.1                                                       514   e-146
Glyma18g52070.1                                                       503   e-142
Glyma12g15190.1                                                       165   8e-41

>Glyma02g10750.1 
          Length = 536

 Score =  514 bits (1323), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/318 (79%), Positives = 281/318 (88%)

Query: 33  VKSILREFRVSANSFLSEYEPLDLLIAPFLTFLLARILRSFLRVIYENGLKATVLGFFMS 92
           + S +  FR SANSFLS+YEPL LL+AP L+ L A  LRSF  ++ ENGLKAT+LGF ++
Sbjct: 1   MDSSISHFRASANSFLSQYEPLALLLAPLLSLLFALALRSFFHLLSENGLKATLLGFLIN 60

Query: 93  FIKLVPGVKSYIDAEKQKVVDQLQSGTKSKRESWRSELPREGLGTRVIEEMKEEKRNDVV 152
             KLVPGVK YIDAEKQKVVD+LQS +KSKRE W++ELP  GLGT V+E+M+EEK ND V
Sbjct: 61  SFKLVPGVKRYIDAEKQKVVDKLQSDSKSKREGWKTELPSTGLGTTVLEKMREEKINDAV 120

Query: 153 WQGKCSGTVYIGGSESEGHFALINEACSMFAHTNPLHSDVFQSVARFEAEVVSMTASLFG 212
           WQGKCSGTVYIGGSES+GHF+LINEACSMFAHTNPLH DVF+SVARFEAEVV+MTA+L G
Sbjct: 121 WQGKCSGTVYIGGSESDGHFSLINEACSMFAHTNPLHLDVFKSVARFEAEVVAMTAALLG 180

Query: 213 GKEKASGGEICGNMTSGGTESILLAVKSSRDYMKAKKGITRPEMIIPESGHSAYDKAAQY 272
            KEK+SGG+ICGNMTSGGTESILLAVKSSRDYMK+KKGITRPEMIIPESGHSAYDKAAQY
Sbjct: 181 SKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESGHSAYDKAAQY 240

Query: 273 FNIKLWRVPVNKKFEADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGELAFQYGIC 332
           FNIKLWR PVNK F+AD KAIRRHINKNTILIVGSAPGFPHG+IDPIEELG LA  +GIC
Sbjct: 241 FNIKLWRAPVNKNFQADAKAIRRHINKNTILIVGSAPGFPHGVIDPIEELGHLASSFGIC 300

Query: 333 LHVDLCLGGFVLPFAHNL 350
            HVDLCLGGFVLPFA  L
Sbjct: 301 FHVDLCLGGFVLPFAREL 318


>Glyma18g52070.1 
          Length = 535

 Score =  503 bits (1295), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/314 (78%), Positives = 277/314 (88%)

Query: 37  LREFRVSANSFLSEYEPLDLLIAPFLTFLLARILRSFLRVIYENGLKATVLGFFMSFIKL 96
           +  FR SANSFLS+YEPL LL+AP L+ L A  LRSF  ++ +NGLKAT+LGF ++ ++L
Sbjct: 4   ISHFRTSANSFLSQYEPLSLLLAPLLSLLFAHALRSFFHLLSQNGLKATLLGFLINSLRL 63

Query: 97  VPGVKSYIDAEKQKVVDQLQSGTKSKRESWRSELPREGLGTRVIEEMKEEKRNDVVWQGK 156
           VPGVK YIDAEKQKVVD+LQS  KSKRE W++ELP  GLGT V+E+M+EEK ND VWQGK
Sbjct: 64  VPGVKGYIDAEKQKVVDKLQSDGKSKREGWKTELPSTGLGTSVLEKMREEKINDAVWQGK 123

Query: 157 CSGTVYIGGSESEGHFALINEACSMFAHTNPLHSDVFQSVARFEAEVVSMTASLFGGKEK 216
           CSGT YIGGSES+GHF+LINEACS FAHTNPLH DVF+SVARFEAEVV+MTA+L G KEK
Sbjct: 124 CSGTGYIGGSESDGHFSLINEACSRFAHTNPLHLDVFKSVARFEAEVVAMTAALLGSKEK 183

Query: 217 ASGGEICGNMTSGGTESILLAVKSSRDYMKAKKGITRPEMIIPESGHSAYDKAAQYFNIK 276
           +SG +ICGNMTSGGTESILLAVKSSRDYMK+KKGITRPE IIPESGHSAYDKAAQYFNIK
Sbjct: 184 SSGRQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPERIIPESGHSAYDKAAQYFNIK 243

Query: 277 LWRVPVNKKFEADVKAIRRHINKNTILIVGSAPGFPHGIIDPIEELGELAFQYGICLHVD 336
           LWRVPVNK F+ADVKAIRRHINKNTILIVGSAPGFPHG+IDPIEELG LA  +GIC HVD
Sbjct: 244 LWRVPVNKNFQADVKAIRRHINKNTILIVGSAPGFPHGVIDPIEELGHLASSFGICFHVD 303

Query: 337 LCLGGFVLPFAHNL 350
           LCLGGFVLPFA  L
Sbjct: 304 LCLGGFVLPFAREL 317


>Glyma12g15190.1 
          Length = 181

 Score =  165 bits (417), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 88/165 (53%), Positives = 104/165 (63%), Gaps = 36/165 (21%)

Query: 133 EGLGTRVIEEMKEEKRNDVVWQGKCSGTVYIGGSESEGHFALINEACSMFAHTNPLHSDV 192
           +GLGT V+E+ +EEK ND +        + IGGSES GHF+LINEACSMFAHTNPLH DV
Sbjct: 3   KGLGTSVLEKRREEKINDAI---LIFVKICIGGSESHGHFSLINEACSMFAHTNPLHLDV 59

Query: 193 FQSVARFEAEVVSMTASLFGGKEKASGGEICGNMTSGGTESILLAVKSSRDYMKAKKGIT 252
           F+SVA FEAEVV+MTA+L G KEK SGG+ICGNMT  GTE I+                 
Sbjct: 60  FKSVAHFEAEVVAMTAALLGSKEKNSGGQICGNMTPSGTEYII----------------- 102

Query: 253 RPEMIIPESGHSAYDKAAQYFNIKLWRVPVNKKFEADVKAIRRHI 297
                           + QYFNIKLW VP+NK F+ DVKAI+  I
Sbjct: 103 ----------------SYQYFNIKLWHVPINKNFQVDVKAIQYEI 131