Jatropha Genome Database

JcCA0144471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144471.10 + phase: 0 
         (180 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g47470.1                                                       228   3e-60
Glyma01g00400.4                                                       223   1e-58
Glyma01g00400.3                                                       223   1e-58
Glyma01g00400.1                                                       223   1e-58
Glyma08g47470.2                                                       179   2e-45
Glyma01g00400.2                                                       176   9e-45

>Glyma08g47470.1 
          Length = 202

 Score =  228 bits (580), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 107/170 (62%), Positives = 132/170 (77%)

Query: 11  QGASYTYWVREATADAAPLPLPKKLSTNDLITSQSQPPTLGSVWNRAGTWEEKNLNKWAT 70
           +GASYTYWVR+ T DAAPLPLP+KL+  DL  SQSQ  TL S WNRAGTWEEK+L+ WAT
Sbjct: 15  EGASYTYWVRKITEDAAPLPLPRKLNPEDLPPSQSQSSTLASAWNRAGTWEEKSLSNWAT 74

Query: 71  DRIKELLVSVGSLEFSCGKAEITEVSKCLGDAFLVTVRNKKRVGYTYELTLKIKGEWTVK 130
            RIKELL S+GS++FS G+AE+ +V+KC+GDAF+V VRNKKRVGYTYELTLK+KGEW ++
Sbjct: 75  PRIKELLFSLGSIQFSFGRAEVEDVTKCVGDAFMVIVRNKKRVGYTYELTLKVKGEWIIQ 134

Query: 131 EEKKNVKAHIDIPEFSFGELDDLQVRSLFSFKCLNVQSELCKVMNGMSLL 180
            EKK +  HID+PEFSFGELDDLQV    S     +  +  ++ N + L 
Sbjct: 135 GEKKFIGGHIDVPEFSFGELDDLQVEVRLSEARDILHQDKTQMRNDLKLF 184


>Glyma01g00400.4 
          Length = 206

 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 134/174 (77%), Gaps = 4/174 (2%)

Query: 11  QGASYTYWVREATADAAPLPLPKKLSTNDL----ITSQSQPPTLGSVWNRAGTWEEKNLN 66
           QGASYTYWVR+ T DAAPLP+P+KL+  D+      SQS+  TLGS WNRAGTWEEK+LN
Sbjct: 15  QGASYTYWVRKITEDAAPLPVPRKLNPEDVPPCHSQSQSRSATLGSAWNRAGTWEEKSLN 74

Query: 67  KWATDRIKELLVSVGSLEFSCGKAEITEVSKCLGDAFLVTVRNKKRVGYTYELTLKIKGE 126
            WAT RIKELL+S+GS++FS G+AE+ +V+KC+GDAF+V VRNKKRVGYTYEL+LK+KGE
Sbjct: 75  NWATPRIKELLISLGSIQFSFGRAEVEDVTKCVGDAFMVIVRNKKRVGYTYELSLKVKGE 134

Query: 127 WTVKEEKKNVKAHIDIPEFSFGELDDLQVRSLFSFKCLNVQSELCKVMNGMSLL 180
           W ++ EKK V  HID+PEFSFGELD+LQV    S     +  +  ++ N + L 
Sbjct: 135 WIIQGEKKFVGGHIDVPEFSFGELDELQVEVRLSEARDILHQDKTQICNDLKLF 188


>Glyma01g00400.3 
          Length = 206

 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 134/174 (77%), Gaps = 4/174 (2%)

Query: 11  QGASYTYWVREATADAAPLPLPKKLSTNDL----ITSQSQPPTLGSVWNRAGTWEEKNLN 66
           QGASYTYWVR+ T DAAPLP+P+KL+  D+      SQS+  TLGS WNRAGTWEEK+LN
Sbjct: 15  QGASYTYWVRKITEDAAPLPVPRKLNPEDVPPCHSQSQSRSATLGSAWNRAGTWEEKSLN 74

Query: 67  KWATDRIKELLVSVGSLEFSCGKAEITEVSKCLGDAFLVTVRNKKRVGYTYELTLKIKGE 126
            WAT RIKELL+S+GS++FS G+AE+ +V+KC+GDAF+V VRNKKRVGYTYEL+LK+KGE
Sbjct: 75  NWATPRIKELLISLGSIQFSFGRAEVEDVTKCVGDAFMVIVRNKKRVGYTYELSLKVKGE 134

Query: 127 WTVKEEKKNVKAHIDIPEFSFGELDDLQVRSLFSFKCLNVQSELCKVMNGMSLL 180
           W ++ EKK V  HID+PEFSFGELD+LQV    S     +  +  ++ N + L 
Sbjct: 135 WIIQGEKKFVGGHIDVPEFSFGELDELQVEVRLSEARDILHQDKTQICNDLKLF 188


>Glyma01g00400.1 
          Length = 206

 Score =  223 bits (567), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 134/174 (77%), Gaps = 4/174 (2%)

Query: 11  QGASYTYWVREATADAAPLPLPKKLSTNDL----ITSQSQPPTLGSVWNRAGTWEEKNLN 66
           QGASYTYWVR+ T DAAPLP+P+KL+  D+      SQS+  TLGS WNRAGTWEEK+LN
Sbjct: 15  QGASYTYWVRKITEDAAPLPVPRKLNPEDVPPCHSQSQSRSATLGSAWNRAGTWEEKSLN 74

Query: 67  KWATDRIKELLVSVGSLEFSCGKAEITEVSKCLGDAFLVTVRNKKRVGYTYELTLKIKGE 126
            WAT RIKELL+S+GS++FS G+AE+ +V+KC+GDAF+V VRNKKRVGYTYEL+LK+KGE
Sbjct: 75  NWATPRIKELLISLGSIQFSFGRAEVEDVTKCVGDAFMVIVRNKKRVGYTYELSLKVKGE 134

Query: 127 WTVKEEKKNVKAHIDIPEFSFGELDDLQVRSLFSFKCLNVQSELCKVMNGMSLL 180
           W ++ EKK V  HID+PEFSFGELD+LQV    S     +  +  ++ N + L 
Sbjct: 135 WIIQGEKKFVGGHIDVPEFSFGELDELQVEVRLSEARDILHQDKTQICNDLKLF 188


>Glyma08g47470.2 
          Length = 130

 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 83/115 (72%), Positives = 99/115 (86%)

Query: 11  QGASYTYWVREATADAAPLPLPKKLSTNDLITSQSQPPTLGSVWNRAGTWEEKNLNKWAT 70
           +GASYTYWVR+ T DAAPLPLP+KL+  DL  SQSQ  TL S WNRAGTWEEK+L+ WAT
Sbjct: 15  EGASYTYWVRKITEDAAPLPLPRKLNPEDLPPSQSQSSTLASAWNRAGTWEEKSLSNWAT 74

Query: 71  DRIKELLVSVGSLEFSCGKAEITEVSKCLGDAFLVTVRNKKRVGYTYELTLKIKG 125
            RIKELL S+GS++FS G+AE+ +V+KC+GDAF+V VRNKKRVGYTYELTLK+KG
Sbjct: 75  PRIKELLFSLGSIQFSFGRAEVEDVTKCVGDAFMVIVRNKKRVGYTYELTLKVKG 129


>Glyma01g00400.2 
          Length = 160

 Score =  176 bits (447), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 86/130 (66%), Positives = 107/130 (82%), Gaps = 6/130 (4%)

Query: 1   MEEEKQQQPPQGASYTYWVREATADAAPLPLPKKLSTNDL----ITSQSQPPTLGSVWNR 56
           +  EK+ Q  QGASYTYWVR+ T DAAPLP+P+KL+  D+      SQS+  TLGS WNR
Sbjct: 7   VSSEKEGQ--QGASYTYWVRKITEDAAPLPVPRKLNPEDVPPCHSQSQSRSATLGSAWNR 64

Query: 57  AGTWEEKNLNKWATDRIKELLVSVGSLEFSCGKAEITEVSKCLGDAFLVTVRNKKRVGYT 116
           AGTWEEK+LN WAT RIKELL+S+GS++FS G+AE+ +V+KC+GDAF+V VRNKKRVGYT
Sbjct: 65  AGTWEEKSLNNWATPRIKELLISLGSIQFSFGRAEVEDVTKCVGDAFMVIVRNKKRVGYT 124

Query: 117 YELTLKIKGE 126
           YEL+LK+KGE
Sbjct: 125 YELSLKVKGE 134