Jatropha Genome Database

JcCA0144381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0144381.10 - phase: 0 /partial
         (211 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g06610.1                                                       361   e-100
Glyma16g03180.1                                                       359   1e-99
Glyma07g06610.2                                                       236   1e-62
Glyma08g26710.1                                                        51   8e-07

>Glyma07g06610.1 
          Length = 344

 Score =  361 bits (926), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 169/211 (80%), Positives = 189/211 (89%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVI AA+ AGL ++ VSFG  EESGQT Q+  K+  +HGPS+RE  LAS+ D+YPNL
Sbjct: 81  MGKAVINAAEAAGLNVVPVSFGCEEESGQTFQIGEKEFLVHGPSDRESALASVLDQYPNL 140

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYT+P+AVN NA LYCKVGVPFVMGTTGGDRDLL+KTV DS +YAVISPQMGKQVVA
Sbjct: 141 IVVDYTIPNAVNGNAELYCKVGVPFVMGTTGGDRDLLHKTVLDSNIYAVISPQMGKQVVA 200

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMNQIQMI 180
           FLAAMEIMAEQFPGAFSGYSLQVLESHQA K+D SGTAKAVISCF KLGVSFDM+QI++I
Sbjct: 201 FLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFNKLGVSFDMDQIKLI 260

Query: 181 RDPKLQIEMVGVPEDHLSGHAFHMYHLTSPD 211
           RDP+ Q+EMVGVPE+HLSGHAFHMYHLTSPD
Sbjct: 261 RDPRQQLEMVGVPEEHLSGHAFHMYHLTSPD 291


>Glyma16g03180.1 
          Length = 344

 Score =  359 bits (921), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 169/211 (80%), Positives = 189/211 (89%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVI AA+ AGL ++ VSFG  EESGQT Q+ GK+  +HGPS+RE VLAS+ D+YPNL
Sbjct: 81  MGKAVINAAEAAGLNVVPVSFGCEEESGQTFQIGGKEFLVHGPSDRESVLASVLDKYPNL 140

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYT+P AVN NA LY KVGVPFVMGTTGGDRDLL+KTV DS +YAVISPQMGKQVVA
Sbjct: 141 IVVDYTIPDAVNGNAELYSKVGVPFVMGTTGGDRDLLHKTVLDSNIYAVISPQMGKQVVA 200

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTSGTAKAVISCFQKLGVSFDMNQIQMI 180
           FLAAMEIMAEQFPGAFSGYSLQVLESHQA K+D SGTAKAVISCF KLGVS+DM+QI++I
Sbjct: 201 FLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFNKLGVSYDMDQIKLI 260

Query: 181 RDPKLQIEMVGVPEDHLSGHAFHMYHLTSPD 211
           RDP+ Q+EMVGVPE+HLSGHAFHMYHLTSPD
Sbjct: 261 RDPRQQLEMVGVPEEHLSGHAFHMYHLTSPD 291


>Glyma07g06610.2 
          Length = 234

 Score =  236 bits (602), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 111/144 (77%), Positives = 126/144 (87%)

Query: 1   MGKAVIKAADTAGLQILSVSFGSAEESGQTVQVCGKDIKIHGPSEREDVLASLYDEYPNL 60
           MGKAVI AA+ AGL ++ VSFG  EESGQT Q+  K+  +HGPS+RE  LAS+ D+YPNL
Sbjct: 81  MGKAVINAAEAAGLNVVPVSFGCEEESGQTFQIGEKEFLVHGPSDRESALASVLDQYPNL 140

Query: 61  IVVDYTVPSAVNDNANLYCKVGVPFVMGTTGGDRDLLYKTVEDSKVYAVISPQMGKQVVA 120
           IVVDYT+P+AVN NA LYCKVGVPFVMGTTGGDRDLL+KTV DS +YAVISPQMGKQVVA
Sbjct: 141 IVVDYTIPNAVNGNAELYCKVGVPFVMGTTGGDRDLLHKTVLDSNIYAVISPQMGKQVVA 200

Query: 121 FLAAMEIMAEQFPGAFSGYSLQVL 144
           FLAAMEIMAEQFPGAFSGYSLQ++
Sbjct: 201 FLAAMEIMAEQFPGAFSGYSLQIV 224


>Glyma08g26710.1 
          Length = 291

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 25/38 (65%), Positives = 28/38 (73%)

Query: 118 VVAFLAAMEIMAEQFPGAFSGYSLQVLESHQAGKLDTS 155
           VVAFLAAMEIMA+QFPGAF GYSLQ   S+     + S
Sbjct: 57  VVAFLAAMEIMAKQFPGAFCGYSLQGFVSYPTTPFELS 94