Jatropha Genome Database

JcCA0143221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0143221.10 - phase: 0 /partial
         (254 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02820.1                                                       224   9e-59
Glyma06g02830.1                                                       205   4e-53
Glyma02g05570.1                                                       157   1e-38
Glyma02g05580.1                                                       155   3e-38
Glyma01g37260.1                                                        81   1e-15
Glyma11g08030.1                                                        75   5e-14
Glyma19g39620.1                                                        54   2e-07

>Glyma04g02820.1 
          Length = 430

 Score =  224 bits (570), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 127/250 (50%), Positives = 160/250 (64%), Gaps = 15/250 (6%)

Query: 1   VRLFLSEESPSQVGLGAQDHLQAKASWLSHPAGIAADDILPPGFEGGQPANQLHIKLSDI 60
           VRLFLSEESPSQVGL +QD+LQAK S    P G  +DDILPPGFEG   ++Q  IK S I
Sbjct: 21  VRLFLSEESPSQVGLNSQDNLQAKTSLSLRPGGAGSDDILPPGFEGTHASSQFEIKPSQI 80

Query: 61  PVIKWKCPPRFVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELE 120
           PVIKW  P + VL++TW+VV+GEESKE E   QREMRVLEA+YPR S+IP NP+ S ++E
Sbjct: 81  PVIKWITPQKIVLNVTWRVVSGEESKEAEDQCQREMRVLEAIYPRISSIPLNPSVSMDVE 140

Query: 121 DLRLNDHQVPLIPITPIEDED-AVDAPSEFRGPYNAPVSSQSQLLASGILPPQYSIPAIS 179
           +    D Q  LIPITP+EDED A +  S    P++    SQS  LASG+L         S
Sbjct: 141 EFHCIDGQTTLIPITPVEDEDAAAETLSYSLEPFHV---SQSLQLASGVLKD-------S 190

Query: 180 NTPVNEKPAAGALLGVEPDVIXXXXXXXXXINKSNDQGSLIDRDLLVKILNNPRLIKKLA 239
           N+  + + A     G+  DV          + KSN+ G+ +D +LL  ILNNP +I+KL 
Sbjct: 191 NSATSMQLAC----GLASDVAVAASVALTNLVKSNEHGNFVDHELLNNILNNPEVIEKLV 246

Query: 240 QDYGAASNVQ 249
            DYGA +N Q
Sbjct: 247 GDYGAINNSQ 256


>Glyma06g02830.1 
          Length = 387

 Score =  205 bits (522), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/250 (49%), Positives = 156/250 (62%), Gaps = 15/250 (6%)

Query: 1   VRLFLSEESPSQVGLGAQDHLQAKASWLSHPAGIAADDILPPGFEGGQPANQLHIKLSDI 60
           VRLFLSEESPSQVGL +QDH+QAK S L HP G  +DDILPPGFEG    +Q  IKLS I
Sbjct: 1   VRLFLSEESPSQVGLNSQDHVQAKTSLLLHPDGAGSDDILPPGFEGTHAKSQSEIKLSQI 60

Query: 61  PVIKWKCPPRFVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELE 120
           PVIKW  PP+  ++ TW+V  GEES EVE   QREMRVLEA+YPR S+IP NP+ S ++E
Sbjct: 61  PVIKWITPPKIEVNPTWRVAVGEESTEVEDQPQREMRVLEAIYPRISSIPQNPSVSMDVE 120

Query: 121 DLRLNDHQVPLIPITPIEDEDAVDAP-SEFRGPYNAPVSSQSQLLASGILPPQYSIPAIS 179
           +    D Q  LIPITPIE+E+A      +   P++    SQS  LA GIL         S
Sbjct: 121 ESHCMDDQTALIPITPIEEEEAAAKALMDSLKPFDV---SQSLQLAPGILKD-------S 170

Query: 180 NTPVNEKPAAGALLGVEPDVIXXXXXXXXXINKSNDQGSLIDRDLLVKILNNPRLIKKLA 239
           N+  + + A     G+  DV+         + K N+ G+ ID + +  ILNNP +I KL 
Sbjct: 171 NSATSMQLAC----GLASDVVAAAFVALTSLVKRNEHGNFIDHESVNHILNNPEVIVKLV 226

Query: 240 QDYGAASNVQ 249
           +DY AA+N Q
Sbjct: 227 RDYRAANNSQ 236


>Glyma02g05570.1 
          Length = 489

 Score =  157 bits (397), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/243 (42%), Positives = 147/243 (60%), Gaps = 28/243 (11%)

Query: 1   VRLFLSEESPSQVGLGAQDHLQAKASWLSHPAGIAADDILPPGFEGGQPANQLHIKLSDI 60
           V+LFLSE+ PS VG  +QDHLQAK S + H + I   + LPPGFE     NQ  ++ S+I
Sbjct: 21  VKLFLSEDFPSIVGQKSQDHLQAKTSSMLH-SSINEPNDLPPGFESSHFLNQPKVEFSNI 79

Query: 61  PVIKWKCPPRFVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELE 120
           P IKW+CPP  V+   W+V AGEES+E E    REMRVLEA+YPR SAIPP+P+ S ++E
Sbjct: 80  PQIKWECPPVVVVRSQWRVAAGEESREKENQKLREMRVLEALYPRLSAIPPSPSVSLDVE 139

Query: 121 DLRLNDHQVPLIPITPIEDEDAVDAPSEFRGPYNAPVSSQSQLLASGILPPQYSIPAISN 180
           +   +D + PLIPI PIE+E++ D                        + P+ ++ A+  
Sbjct: 140 EEDYDDGRTPLIPIIPIEEEESTD------------------------ILPELAV-ALKP 174

Query: 181 TPVNEKPAAGALLGVEPDVIXXXXXXXXXINKSNDQGSLIDRDLLVKILNNPRLIKKLAQ 240
           +P N +P AG   G+E D+          I +SN+QG+LID DLL KI  +P+++++L  
Sbjct: 175 SP-NVQPMAGVSSGMEADLAAASSVVATII-RSNEQGTLIDMDLLGKIFTDPKILEQLIN 232

Query: 241 DYG 243
           ++G
Sbjct: 233 EHG 235


>Glyma02g05580.1 
          Length = 487

 Score =  155 bits (393), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/248 (42%), Positives = 150/248 (60%), Gaps = 15/248 (6%)

Query: 1   VRLFLSEESPSQVGLGAQDHLQAKASWLSHPAGIAADDILPPGFEGGQPANQLHIKLSDI 60
           V+LFLS++ PS VG  +QDHLQAK S + H + I   + LPPGFE     NQ  ++LS+I
Sbjct: 21  VKLFLSDDYPSIVGQKSQDHLQAKTSSMLH-SSINEPNDLPPGFESSHFLNQPKVELSNI 79

Query: 61  PVIKWKCPPRFVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELE 120
           P+IKW+CPP  V+   W+V AGEES+E E    REMRVLEA+YPR SAIPP+P+ S ++E
Sbjct: 80  PLIKWECPPLVVVRSQWRVAAGEESREKENQKLREMRVLEALYPRLSAIPPSPSVSLDVE 139

Query: 121 DLRLNDHQVPLIPITPIEDEDAVDAPSEFRGPYNAPVSSQSQ------LLASGILPPQYS 174
           +   +D   PLIPI PIE+E+++D   E         + QSQ         + I     +
Sbjct: 140 EEDYDDGITPLIPIIPIEEEESMDILPELAVALKPSPNVQSQNSPQYISAKTSISSASNA 199

Query: 175 IPAISNTPVNEKPAAGALLGVEPDVIXXXXXXXXXINKSNDQGSLIDRDLLVKILNNPRL 234
            PA+S+ P   +P A A L     V+         I +SN+QG+LID DLL KI  +P++
Sbjct: 200 SPAVSHDPC-VRPLAEADLAAASSVV-------ATIIRSNEQGTLIDMDLLGKIFTDPKI 251

Query: 235 IKKLAQDY 242
           +++L  ++
Sbjct: 252 LEQLINEH 259


>Glyma01g37260.1 
          Length = 387

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 36/142 (25%)

Query: 1   VRLFLSEESPSQVGLGAQDHLQAKASWLSHPAGIAADDILPPGFEGGQPANQLHIKLSDI 60
           V+LFLSE+ PS VG  +QDHLQAK         I   D LPPGFE     NQ + KLS I
Sbjct: 15  VKLFLSEDCPSTVGHKSQDHLQAKK------MSIGPSDDLPPGFEDDHFQNQSNTKLSHI 68

Query: 61  PVIKWKCPPRFVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELE 120
           P IKW+CP  F L   W+   G   ++                         P+ S+ +E
Sbjct: 69  PQIKWECPSLFTLSSDWR---GSWRRQ-------------------------PSVSSNVE 100

Query: 121 DLRLNDHQ--VPLIPITPIEDE 140
           +   +D++  +PL+P+ P+E+E
Sbjct: 101 NECYDDNESVIPLLPLIPVEEE 122


>Glyma11g08030.1 
          Length = 353

 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 90/187 (48%), Gaps = 19/187 (10%)

Query: 71  FVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELEDLRLNDHQVP 130
           F L   W+V AGE+S E      REMRV EA+YPR SAIP  P+ S E E    N+  +P
Sbjct: 1   FTLSNDWRVAAGEDSTETCDQKLREMRVPEAIYPRISAIPDGPSES-EKEFYDDNESLIP 59

Query: 131 LIPITPIEDEDAVDAPSEFRGPYNAPVSSQSQLLASGILPPQYSIPAIS---------NT 181
           LIP+ P+E+E+              P SS  +L        QY  PAIS         N+
Sbjct: 60  LIPLIPVEEEEESAE-------DIEPDSSIKKLHKQNSQ-QQYIPPAISLVNPECSNVNS 111

Query: 182 PVNEKPAAGALLGVEPDVIXXXXXXXXXINKSNDQGSLIDRDLLVKILNNPRLIKKLAQD 241
             + KP  GA       +          I K N+QG+LID DLLVK+  +P +I+KL + 
Sbjct: 112 HCSGKP-LGATSSEADIIAAASSAAVASIIKRNEQGTLIDMDLLVKLFTDPTMIEKLIEQ 170

Query: 242 YGAASNV 248
              A+  
Sbjct: 171 NRTATTT 177


>Glyma19g39620.1 
          Length = 984

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 63  IKWKCPPRFVLDLTWQVVAGEESKEVEVHNQREMRVLEAVYPRPSAIPPNPAFSAELEDL 122
           I W+ P    L  TW+V  GE SKEVEV   R  R  E +Y     +PPNP    +LE +
Sbjct: 490 IPWRTPAEVELKDTWRVGGGENSKEVEVQRNRNRRDKEIIYKTVQEMPPNPKEPWDLE-M 548

Query: 123 RLNDHQVPLIPITPIEDEDAVD 144
             +D     IPI  + D D  D
Sbjct: 549 DYDDTLTLEIPIEQLPDGDGAD 570