Jatropha Genome Database

JcCA0143091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0143091.10 - phase: 0 
         (228 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g37330.1                                                       275   3e-74
Glyma06g17750.1                                                       272   2e-73
Glyma06g17750.2                                                       250   1e-66

>Glyma04g37330.1 
          Length = 221

 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 132/170 (77%), Positives = 148/170 (87%)

Query: 59  PLPSLAIPSPNSLSSPVIPTTPFSQSKNLILGPEDGKIRPCPSTNPSCVSTNPKSSSFAF 118
           PLPS AIPS NS S P+  TTPFSQSKNL LG E+GKIRPCPS NP C+STNPKSSSFAF
Sbjct: 51  PLPSYAIPSLNSQSPPISFTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFAF 110

Query: 119 PLTIPDDSTDNAIQKLQEAILKTQRNAKIQVIEDAPNGTYLQAEVDGGFGRDVLEFLVKG 178
           P  IP +S D+AIQKL+EAILKTQ+N K Q +ED+P+G YLQAEVDGGFGRDV+EFLVKG
Sbjct: 111 PWLIPSNSLDDAIQKLREAILKTQKNVKFQPVEDSPDGQYLQAEVDGGFGRDVIEFLVKG 170

Query: 179 DVVAYRCMATKVTYVYPFTTALGDSKGQEERMKKIIEQLGWYAPSFDSMD 228
           DVVAYRC+A KVTYVYPFTTALGDSKGQE R+K+I + LGWYAPSFDSM+
Sbjct: 171 DVVAYRCVAMKVTYVYPFTTALGDSKGQEARLKQINDHLGWYAPSFDSME 220


>Glyma06g17750.1 
          Length = 223

 Score =  272 bits (696), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 130/170 (76%), Positives = 147/170 (86%)

Query: 59  PLPSLAIPSPNSLSSPVIPTTPFSQSKNLILGPEDGKIRPCPSTNPSCVSTNPKSSSFAF 118
           PLPS AIPS NS   P+  TTPFSQSKNL LG E+GKIRPCPS NP C+STNPKSSSF+F
Sbjct: 53  PLPSHAIPSLNSQPPPISLTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFSF 112

Query: 119 PLTIPDDSTDNAIQKLQEAILKTQRNAKIQVIEDAPNGTYLQAEVDGGFGRDVLEFLVKG 178
           P  IP +S+D+AIQKL+EAILKTQ+N K Q +ED P+G YLQAEVDGGFGRD+LEFLVKG
Sbjct: 113 PWLIPSNSSDDAIQKLREAILKTQKNVKFQPVEDTPDGQYLQAEVDGGFGRDILEFLVKG 172

Query: 179 DVVAYRCMATKVTYVYPFTTALGDSKGQEERMKKIIEQLGWYAPSFDSMD 228
           DVVAYRC+A KVTYVYPFTTA GDSKGQE R+K+I +QLGWYAPSFDSM+
Sbjct: 173 DVVAYRCVAMKVTYVYPFTTAFGDSKGQEARLKQINDQLGWYAPSFDSME 222


>Glyma06g17750.2 
          Length = 212

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 121/160 (75%), Positives = 137/160 (85%)

Query: 59  PLPSLAIPSPNSLSSPVIPTTPFSQSKNLILGPEDGKIRPCPSTNPSCVSTNPKSSSFAF 118
           PLPS AIPS NS   P+  TTPFSQSKNL LG E+GKIRPCPS NP C+STNPKSSSF+F
Sbjct: 53  PLPSHAIPSLNSQPPPISLTTPFSQSKNLELGLENGKIRPCPSINPGCISTNPKSSSFSF 112

Query: 119 PLTIPDDSTDNAIQKLQEAILKTQRNAKIQVIEDAPNGTYLQAEVDGGFGRDVLEFLVKG 178
           P  IP +S+D+AIQKL+EAILKTQ+N K Q +ED P+G YLQAEVDGGFGRD+LEFLVKG
Sbjct: 113 PWLIPSNSSDDAIQKLREAILKTQKNVKFQPVEDTPDGQYLQAEVDGGFGRDILEFLVKG 172

Query: 179 DVVAYRCMATKVTYVYPFTTALGDSKGQEERMKKIIEQLG 218
           DVVAYRC+A KVTYVYPFTTA GDSKGQE R+K+I +QLG
Sbjct: 173 DVVAYRCVAMKVTYVYPFTTAFGDSKGQEARLKQINDQLG 212