Jatropha Genome Database

JcCA0142891.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0142891.20 - phase: 0 /pseudo/partial
         (70 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g34080.1                                                        96   8e-21
Glyma06g20400.1                                                        91   3e-19
Glyma02g02250.1                                                        85   2e-17
Glyma01g05310.1                                                        84   4e-17
Glyma08g41000.1                                                        82   9e-17
Glyma18g15920.1                                                        81   3e-16
Glyma19g02510.1                                                        77   4e-15
Glyma13g05280.1                                                        77   4e-15
Glyma18g49320.1                                                        75   2e-14
Glyma09g37370.1                                                        74   4e-14

>Glyma04g34080.1 
          Length = 92

 Score = 95.9 bits (237), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 47/50 (94%), Positives = 50/50 (100%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 70
          +VSA+KVLQETCNYIR+LHREVDDLSERLSELLATTDTAQAAIIRNLLMQ
Sbjct: 43 KVSASKVLQETCNYIRSLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 92


>Glyma06g20400.1 
          Length = 92

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/50 (90%), Positives = 48/50 (96%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 70
          +VSA+KVLQETCNYIR+LHREV DLSERLSELL TTDTAQAAIIRNLLMQ
Sbjct: 43 KVSASKVLQETCNYIRSLHREVGDLSERLSELLDTTDTAQAAIIRNLLMQ 92


>Glyma02g02250.1 
          Length = 93

 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 43/51 (84%), Positives = 48/51 (94%), Gaps = 2/51 (3%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 69
          +VSAAKVLQETCNYI+NLHREVDDLS+RLSELLA TD  +AQAAIIR+LLM
Sbjct: 43 KVSAAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM 93


>Glyma01g05310.1 
          Length = 93

 Score = 84.0 bits (206), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 42/51 (82%), Positives = 48/51 (94%), Gaps = 2/51 (3%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 69
          +VS+AKVLQETCNYI+NLHREVDDLS+RLSELLA TD  +AQAAIIR+LLM
Sbjct: 43 KVSSAKVLQETCNYIKNLHREVDDLSDRLSELLANTDSNSAQAAIIRSLLM 93


>Glyma08g41000.1 
          Length = 93

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/51 (80%), Positives = 49/51 (96%), Gaps = 2/51 (3%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 69
          +VSA+KVLQETCNYI++LHREVDDLS+RLS+LLATTD  +AQAAIIR+LLM
Sbjct: 43 KVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLM 93


>Glyma18g15920.1 
          Length = 93

 Score = 80.9 bits (198), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/51 (78%), Positives = 49/51 (96%), Gaps = 2/51 (3%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLATTD--TAQAAIIRNLLM 69
          +VSA+KVLQETCNYI++LHREVDDLS+RLS+LLATTD  +AQAAIIR+LL+
Sbjct: 43 KVSASKVLQETCNYIKSLHREVDDLSDRLSQLLATTDSNSAQAAIIRSLLL 93


>Glyma19g02510.1 
          Length = 91

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/50 (76%), Positives = 46/50 (92%), Gaps = 2/50 (4%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLL 68
          +VSA+KVLQETCNYIR+LHREVDDLSERLS+LLAT   D+ +AAIIR+L+
Sbjct: 41 KVSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSPEAAIIRSLI 90


>Glyma13g05280.1 
          Length = 91

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/50 (76%), Positives = 46/50 (92%), Gaps = 2/50 (4%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLL 68
          +VSA+KVLQETCNYIR+LHREVDDLSERLS+LLAT   D+ +AAIIR+L+
Sbjct: 41 KVSASKVLQETCNYIRSLHREVDDLSERLSQLLATIDADSPEAAIIRSLI 90


>Glyma18g49320.1 
          Length = 92

 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 44/52 (84%), Gaps = 2/52 (3%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLLMQ 70
          +VSA+KVLQETCNYIR LHREV DLSERLS+LL T   D+A+A IIR+LL Q
Sbjct: 41 KVSASKVLQETCNYIRGLHREVSDLSERLSQLLTTIDADSAEAGIIRSLLNQ 92


>Glyma09g37370.1 
          Length = 91

 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 37/50 (74%), Positives = 44/50 (88%), Gaps = 2/50 (4%)

Query: 21 QVSAAKVLQETCNYIRNLHREVDDLSERLSELLAT--TDTAQAAIIRNLL 68
          +VSA+KVLQETCNYIR+LHREV DLSERLS+LL T   D+A+A IIR+LL
Sbjct: 41 KVSASKVLQETCNYIRSLHREVSDLSERLSQLLTTIDADSAEAGIIRSLL 90